Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cd109Q8R422 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cd109Q8R422 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC16.17■□□□□ 0.18
Cd109Q8R422 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cd109Q8R422 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cd109Q8R422 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cd109Q8R422 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cd109Q8R422 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cd109Q8R422 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC16.17■□□□□ 0.18
Cd109Q8R422 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cd109Q8R422 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cd109Q8R422 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Cd109Q8R422 Gm43778-201ENSMUST00000199438 199 ntBASIC16.17■□□□□ 0.18
Cd109Q8R422 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cd109Q8R422 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC16.17■□□□□ 0.18
Cd109Q8R422 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC16.17■□□□□ 0.18
Cd109Q8R422 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC16.17■□□□□ 0.18
Cd109Q8R422 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC16.17■□□□□ 0.18
Cd109Q8R422 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cd109Q8R422 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cd109Q8R422 Gm18210-201ENSMUST00000209001 1524 ntBASIC16.17■□□□□ 0.18
Cd109Q8R422 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC16.17■□□□□ 0.18
Cd109Q8R422 Gm14005-209ENSMUST00000224993 1832 ntBASIC16.16■□□□□ 0.18
Cd109Q8R422 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cd109Q8R422 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd109Q8R422 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd109Q8R422 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cd109Q8R422 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC16.16■□□□□ 0.18
Cd109Q8R422 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cd109Q8R422 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC16.16■□□□□ 0.18
Cd109Q8R422 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Cd109Q8R422 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cd109Q8R422 Snord55-201ENSMUST00000174939 79 ntBASIC16.16■□□□□ 0.18
Cd109Q8R422 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cd109Q8R422 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC16.16■□□□□ 0.18
Cd109Q8R422 Gm37852-201ENSMUST00000193027 350 ntBASIC16.16■□□□□ 0.18
Cd109Q8R422 Gm20781-201ENSMUST00000193154 693 ntBASIC16.16■□□□□ 0.18
Cd109Q8R422 Gm21736-201ENSMUST00000195399 693 ntBASIC16.16■□□□□ 0.18
Cd109Q8R422 Gm7902-201ENSMUST00000198842 947 ntBASIC16.16■□□□□ 0.18
Cd109Q8R422 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC16.16■□□□□ 0.18
Cd109Q8R422 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC16.16■□□□□ 0.18
Cd109Q8R422 Gm4903-201ENSMUST00000210462 405 ntBASIC16.16■□□□□ 0.18
Cd109Q8R422 CT025618.1-203ENSMUST00000227008 589 ntBASIC16.16■□□□□ 0.18
Cd109Q8R422 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC16.16■□□□□ 0.18
Cd109Q8R422 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
Cd109Q8R422 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cd109Q8R422 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd109Q8R422 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cd109Q8R422 Gm42829-201ENSMUST00000198417 2585 ntBASIC16.16■□□□□ 0.18
Cd109Q8R422 Gm5434-202ENSMUST00000222384 1451 ntBASIC16.16■□□□□ 0.18
Cd109Q8R422 Gm5434-201ENSMUST00000071825 1451 ntBASIC16.16■□□□□ 0.18
Cd109Q8R422 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Cd109Q8R422 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd109Q8R422 AC124397.2-201ENSMUST00000225575 2215 ntBASIC16.16■□□□□ 0.18
Cd109Q8R422 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cd109Q8R422 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd109Q8R422 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cd109Q8R422 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd109Q8R422 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd109Q8R422 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Cd109Q8R422 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd109Q8R422 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd109Q8R422 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd109Q8R422 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd109Q8R422 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd109Q8R422 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd109Q8R422 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cd109Q8R422 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cd109Q8R422 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd109Q8R422 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cd109Q8R422 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC16.15■□□□□ 0.18
Cd109Q8R422 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cd109Q8R422 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd109Q8R422 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd109Q8R422 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd109Q8R422 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC16.15■□□□□ 0.18
Cd109Q8R422 AC153962.2-201ENSMUST00000219417 550 ntBASIC16.15■□□□□ 0.18
Cd109Q8R422 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd109Q8R422 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cd109Q8R422 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd109Q8R422 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cd109Q8R422 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd109Q8R422 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd109Q8R422 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd109Q8R422 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd109Q8R422 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Cd109Q8R422 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cd109Q8R422 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd109Q8R422 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd109Q8R422 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd109Q8R422 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cd109Q8R422 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cd109Q8R422 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Cd109Q8R422 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cd109Q8R422 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC16.14■□□□□ 0.17
Cd109Q8R422 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd109Q8R422 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd109Q8R422 Gm11952-201ENSMUST00000121172 821 ntBASIC16.14■□□□□ 0.17
Cd109Q8R422 Gm5529-201ENSMUST00000165691 891 ntBASIC16.14■□□□□ 0.17
Cd109Q8R422 Gm26272-201ENSMUST00000179241 132 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms