Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim29Q8R2Q0 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trim29Q8R2Q0 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Trim29Q8R2Q0 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim29Q8R2Q0 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim29Q8R2Q0 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim29Q8R2Q0 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.14□□□□□ -0.31
Trim29Q8R2Q0 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trim29Q8R2Q0 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim29Q8R2Q0 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim29Q8R2Q0 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim29Q8R2Q0 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim29Q8R2Q0 CT010447.1-201ENSMUST00000225657 1608 ntBASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Gm14058-201ENSMUST00000116082 735 ntBASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Gm13035-201ENSMUST00000117496 342 ntBASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Mir5132-201ENSMUST00000175166 71 ntBASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Gm6905-201ENSMUST00000205729 511 ntBASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 AC112945.1-201ENSMUST00000226413 514 ntBASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Gm10254-201ENSMUST00000052888 867 ntBASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim29Q8R2Q0 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Gm11450-201ENSMUST00000121144 333 ntBASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Ntng1-201ENSMUST00000051253 327 ntBASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms