Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC15.02■□□□□ -0
Ddx54Q8K4L0 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC15.02■□□□□ -0
Ddx54Q8K4L0 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ddx54Q8K4L0 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ddx54Q8K4L0 n-R5s130-201ENSMUST00000178128 119 ntBASIC15.02■□□□□ -0
Ddx54Q8K4L0 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ddx54Q8K4L0 Gm24312-201ENSMUST00000178677 119 ntBASIC15.02■□□□□ -0
Ddx54Q8K4L0 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ddx54Q8K4L0 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ddx54Q8K4L0 n-R5s106-201ENSMUST00000179060 119 ntBASIC15.02■□□□□ -0
Ddx54Q8K4L0 Gm26443-201ENSMUST00000179610 110 ntBASIC15.02■□□□□ -0
Ddx54Q8K4L0 n-R5s118-201ENSMUST00000179887 119 ntBASIC15.02■□□□□ -0
Ddx54Q8K4L0 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ddx54Q8K4L0 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC15.02■□□□□ -0
Ddx54Q8K4L0 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC15.02■□□□□ -0
Ddx54Q8K4L0 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC15.02■□□□□ -0
Ddx54Q8K4L0 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx54Q8K4L0 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Ddx54Q8K4L0 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC15.02□□□□□ -0.01
Ddx54Q8K4L0 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx54Q8K4L0 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx54Q8K4L0 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx54Q8K4L0 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx54Q8K4L0 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx54Q8K4L0 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx54Q8K4L0 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx54Q8K4L0 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Gm44190-201ENSMUST00000205083 1401 ntBASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Gm3828-201ENSMUST00000121817 257 ntBASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Gm18733-202ENSMUST00000174447 401 ntBASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Gm27444-201ENSMUST00000184157 137 ntBASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx54Q8K4L0 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx54Q8K4L0 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Gm11736-201ENSMUST00000121468 505 ntBASIC15□□□□□ -0.01
Ddx54Q8K4L0 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC15□□□□□ -0.01
Ddx54Q8K4L0 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Gm20493-201ENSMUST00000173706 213 ntBASIC15□□□□□ -0.01
Ddx54Q8K4L0 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx54Q8K4L0 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Gm38233-201ENSMUST00000194259 807 ntBASIC15□□□□□ -0.01
Ddx54Q8K4L0 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC15□□□□□ -0.01
Ddx54Q8K4L0 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Ddx54Q8K4L0 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ddx54Q8K4L0 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC15□□□□□ -0.01
Ddx54Q8K4L0 AC117769.1-201ENSMUST00000224716 1120 ntBASIC15□□□□□ -0.01
Ddx54Q8K4L0 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms