Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp40Q8BWR4 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp40Q8BWR4 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp40Q8BWR4 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp40Q8BWR4 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp40Q8BWR4 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Usp40Q8BWR4 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp40Q8BWR4 AC154639.1-201ENSMUST00000224393 2849 ntBASIC15.71■□□□□ 0.11
Usp40Q8BWR4 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp40Q8BWR4 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp40Q8BWR4 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC15.71■□□□□ 0.11
Usp40Q8BWR4 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp40Q8BWR4 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC15.71■□□□□ 0.11
Usp40Q8BWR4 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp40Q8BWR4 Gm43002-201ENSMUST00000200310 155 ntBASIC15.71■□□□□ 0.11
Usp40Q8BWR4 Gm18463-201ENSMUST00000207258 474 ntBASIC15.71■□□□□ 0.11
Usp40Q8BWR4 Gm18460-201ENSMUST00000208088 464 ntBASIC15.71■□□□□ 0.11
Usp40Q8BWR4 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Usp40Q8BWR4 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC15.71■□□□□ 0.11
Usp40Q8BWR4 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Usp40Q8BWR4 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Usp40Q8BWR4 AC154572.1-201ENSMUST00000226098 1204 ntBASIC15.71■□□□□ 0.11
Usp40Q8BWR4 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC15.71■□□□□ 0.11
Usp40Q8BWR4 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp40Q8BWR4 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp40Q8BWR4 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp40Q8BWR4 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp40Q8BWR4 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp40Q8BWR4 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Usp40Q8BWR4 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Usp40Q8BWR4 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Mir453-201ENSMUST00000104732 82 ntBASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Gm13445-201ENSMUST00000121664 307 ntBASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 AC122024.3-201ENSMUST00000217719 294 ntBASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp40Q8BWR4 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp40Q8BWR4 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Usp40Q8BWR4 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp40Q8BWR4 Erich3-203ENSMUST00000189969 3460 ntBASIC15.69■□□□□ 0.1
Usp40Q8BWR4 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp40Q8BWR4 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Usp40Q8BWR4 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp40Q8BWR4 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp40Q8BWR4 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp40Q8BWR4 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
Usp40Q8BWR4 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC15.69■□□□□ 0.1
Usp40Q8BWR4 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC15.69■□□□□ 0.1
Usp40Q8BWR4 Gm26989-201ENSMUST00000182608 749 ntBASIC15.69■□□□□ 0.1
Usp40Q8BWR4 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp40Q8BWR4 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Usp40Q8BWR4 AC158392.3-201ENSMUST00000224271 1284 ntBASIC15.69■□□□□ 0.1
Usp40Q8BWR4 AC154589.2-201ENSMUST00000228847 251 ntBASIC15.69■□□□□ 0.1
Usp40Q8BWR4 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp40Q8BWR4 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp40Q8BWR4 Gm45416-201ENSMUST00000209713 2201 ntBASIC15.69■□□□□ 0.1
Usp40Q8BWR4 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp40Q8BWR4 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp40Q8BWR4 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp40Q8BWR4 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Usp40Q8BWR4 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp40Q8BWR4 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC15.69■□□□□ 0.1
Usp40Q8BWR4 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Usp40Q8BWR4 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp40Q8BWR4 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Usp40Q8BWR4 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp40Q8BWR4 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp40Q8BWR4 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms