Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 Gm5733-201ENSMUST00000190232 939 ntBASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 Gm43002-201ENSMUST00000200310 155 ntBASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 Gm19287-201ENSMUST00000203190 358 ntBASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 Gm5705-201ENSMUST00000066241 711 ntBASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Cpsf4Q8BQZ5 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Cpsf4Q8BQZ5 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Cpsf4Q8BQZ5 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Cpsf4Q8BQZ5 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cpsf4Q8BQZ5 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cpsf4Q8BQZ5 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cpsf4Q8BQZ5 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cpsf4Q8BQZ5 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Cpsf4Q8BQZ5 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Cpsf4Q8BQZ5 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.15□□□□□ -0.63
Cpsf4Q8BQZ5 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cpsf4Q8BQZ5 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Gm14058-201ENSMUST00000116082 735 ntBASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Gm13035-201ENSMUST00000117496 342 ntBASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Gm11960-201ENSMUST00000122068 925 ntBASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Gm9192-201ENSMUST00000183221 985 ntBASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cpsf4Q8BQZ5 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms