Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Gm12899-201ENSMUST00000120565 551 ntBASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Gm37826-201ENSMUST00000195329 322 ntBASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Gm44008-201ENSMUST00000204345 412 ntBASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Gm5468-202ENSMUST00000227851 682 ntBASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ubfd1Q78JW9 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Gm8194-201ENSMUST00000159783 859 ntBASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Gm23153-201ENSMUST00000175323 313 ntBASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Mir6998-201ENSMUST00000183343 64 ntBASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Gm28388-201ENSMUST00000186262 437 ntBASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Gm37905-201ENSMUST00000195310 341 ntBASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubfd1Q78JW9 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.21□□□□□ -0.61
Ubfd1Q78JW9 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ubfd1Q78JW9 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ubfd1Q78JW9 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ubfd1Q78JW9 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ubfd1Q78JW9 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ubfd1Q78JW9 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ubfd1Q78JW9 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ubfd1Q78JW9 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ubfd1Q78JW9 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Ubfd1Q78JW9 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.21□□□□□ -0.61
Ubfd1Q78JW9 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ubfd1Q78JW9 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 103.9 ms