Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CtifQ6PEE2 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.22□□□□□ -0.45
CtifQ6PEE2 Gm45597-201ENSMUST00000211524 1994 ntBASIC12.22□□□□□ -0.45
CtifQ6PEE2 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CtifQ6PEE2 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Mir1247-201ENSMUST00000116706 82 ntBASIC12.22□□□□□ -0.45
CtifQ6PEE2 Gm12203-201ENSMUST00000118235 598 ntBASIC12.22□□□□□ -0.45
CtifQ6PEE2 Gm12209-201ENSMUST00000120089 596 ntBASIC12.22□□□□□ -0.45
CtifQ6PEE2 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.22□□□□□ -0.45
CtifQ6PEE2 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Slco5a1-205ENSMUST00000146763 3437 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CtifQ6PEE2 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CtifQ6PEE2 AC156802.2-203ENSMUST00000226032 1906 ntBASIC12.21□□□□□ -0.45
CtifQ6PEE2 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CtifQ6PEE2 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.21□□□□□ -0.45
CtifQ6PEE2 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.21□□□□□ -0.45
CtifQ6PEE2 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CtifQ6PEE2 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CtifQ6PEE2 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CtifQ6PEE2 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CtifQ6PEE2 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CtifQ6PEE2 Gm43112-201ENSMUST00000196665 3122 ntBASIC12.21□□□□□ -0.45
CtifQ6PEE2 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CtifQ6PEE2 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CtifQ6PEE2 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CtifQ6PEE2 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
CtifQ6PEE2 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CtifQ6PEE2 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CtifQ6PEE2 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CtifQ6PEE2 Gm23061-201ENSMUST00000102348 116 ntBASIC12.21□□□□□ -0.45
CtifQ6PEE2 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.21□□□□□ -0.45
CtifQ6PEE2 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CtifQ6PEE2 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.21□□□□□ -0.45
CtifQ6PEE2 Gm8810-201ENSMUST00000172895 754 ntBASIC12.21□□□□□ -0.45
CtifQ6PEE2 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.21□□□□□ -0.45
CtifQ6PEE2 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.21□□□□□ -0.45
CtifQ6PEE2 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.21□□□□□ -0.45
CtifQ6PEE2 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.21□□□□□ -0.45
CtifQ6PEE2 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CtifQ6PEE2 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CtifQ6PEE2 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.21□□□□□ -0.45
CtifQ6PEE2 Gm9257-201ENSMUST00000221254 232 ntBASIC12.21□□□□□ -0.45
CtifQ6PEE2 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CtifQ6PEE2 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CtifQ6PEE2 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CtifQ6PEE2 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
CtifQ6PEE2 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CtifQ6PEE2 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
CtifQ6PEE2 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CtifQ6PEE2 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CtifQ6PEE2 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CtifQ6PEE2 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
CtifQ6PEE2 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CtifQ6PEE2 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.21□□□□□ -0.46
CtifQ6PEE2 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CtifQ6PEE2 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
CtifQ6PEE2 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CtifQ6PEE2 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
CtifQ6PEE2 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CtifQ6PEE2 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CtifQ6PEE2 Tmem30c-203ENSMUST00000120112 3478 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CtifQ6PEE2 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CtifQ6PEE2 Gm6170-201ENSMUST00000187672 1388 ntBASIC12.2□□□□□ -0.46
CtifQ6PEE2 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CtifQ6PEE2 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CtifQ6PEE2 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CtifQ6PEE2 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CtifQ6PEE2 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CtifQ6PEE2 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CtifQ6PEE2 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CtifQ6PEE2 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.2□□□□□ -0.46
CtifQ6PEE2 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.2□□□□□ -0.46
CtifQ6PEE2 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CtifQ6PEE2 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms