Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Gm13127-201ENSMUST00000118978 1389 ntBASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Bcl2-202ENSMUST00000189999 2841 ntBASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf220Q6PDX6 Gm13437-201ENSMUST00000122434 1981 ntBASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Eef2-201ENSMUST00000047864 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Gm3890-201ENSMUST00000182416 207 ntBASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Gm44958-201ENSMUST00000203734 736 ntBASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Arhgef33-209ENSMUST00000225223 714 ntBASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf220Q6PDX6 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Togaram2-201ENSMUST00000097284 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Gm43086-201ENSMUST00000202536 2657 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Gm12390-201ENSMUST00000117897 397 ntBASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Gm13342-201ENSMUST00000121055 207 ntBASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Gm24548-201ENSMUST00000158650 108 ntBASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Gm8738-201ENSMUST00000172606 329 ntBASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms