Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Btrc-209ENSMUST00000224478 2194 ntBASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Krt39Q6IFX4 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Gm13296-201ENSMUST00000117854 997 ntBASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Gm13665-201ENSMUST00000120830 528 ntBASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Gm26361-201ENSMUST00000158868 186 ntBASIC12.69□□□□□ -0.38
Krt39Q6IFX4 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Krt39Q6IFX4 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Gm5616-201ENSMUST00000165252 384 ntBASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Gm8741-201ENSMUST00000174736 384 ntBASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Gm4157-201ENSMUST00000211647 679 ntBASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Gm17827-201ENSMUST00000211825 742 ntBASIC12.68□□□□□ -0.38
Krt39Q6IFX4 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.68□□□□□ -0.38
Krt39Q6IFX4 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Krt39Q6IFX4 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms