Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
VcanQ62059 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VcanQ62059 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VcanQ62059 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC10.47□□□□□ -0.73
VcanQ62059 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VcanQ62059 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VcanQ62059 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
VcanQ62059 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
VcanQ62059 Gm42651-201ENSMUST00000199851 1339 ntBASIC10.47□□□□□ -0.73
VcanQ62059 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC10.47□□□□□ -0.73
VcanQ62059 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VcanQ62059 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VcanQ62059 Gm37723-201ENSMUST00000194480 565 ntBASIC10.47□□□□□ -0.73
VcanQ62059 Gm42952-204ENSMUST00000198572 408 ntTSL 3 BASIC10.47□□□□□ -0.73
VcanQ62059 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VcanQ62059 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.47□□□□□ -0.73
VcanQ62059 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VcanQ62059 Rdh7-201ENSMUST00000047199 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VcanQ62059 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VcanQ62059 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.47□□□□□ -0.73
VcanQ62059 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
VcanQ62059 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
VcanQ62059 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC10.47□□□□□ -0.73
VcanQ62059 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VcanQ62059 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.47□□□□□ -0.73
VcanQ62059 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VcanQ62059 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
VcanQ62059 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VcanQ62059 Gm15132-201ENSMUST00000118581 652 ntBASIC10.46□□□□□ -0.73
VcanQ62059 Gm13071-201ENSMUST00000122237 376 ntBASIC10.46□□□□□ -0.73
VcanQ62059 Gm25288-201ENSMUST00000122800 265 ntBASIC10.46□□□□□ -0.73
VcanQ62059 Gm23899-201ENSMUST00000158112 90 ntBASIC10.46□□□□□ -0.73
VcanQ62059 1010001N08Rik-202ENSMUST00000181316 728 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
VcanQ62059 Gm19013-201ENSMUST00000183895 1222 ntBASIC10.46□□□□□ -0.73
VcanQ62059 Gm19014-201ENSMUST00000184828 1189 ntBASIC10.46□□□□□ -0.73
VcanQ62059 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC10.46□□□□□ -0.73
VcanQ62059 Gm37688-201ENSMUST00000195195 465 ntBASIC10.46□□□□□ -0.73
VcanQ62059 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.46□□□□□ -0.73
VcanQ62059 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
VcanQ62059 Gm9619-201ENSMUST00000211587 762 ntBASIC10.46□□□□□ -0.73
VcanQ62059 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC10.46□□□□□ -0.73
VcanQ62059 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
VcanQ62059 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
VcanQ62059 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
VcanQ62059 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
VcanQ62059 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
VcanQ62059 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
VcanQ62059 Gm37844-201ENSMUST00000192473 4097 ntBASIC10.46□□□□□ -0.73
VcanQ62059 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC10.46□□□□□ -0.73
VcanQ62059 Gm18466-201ENSMUST00000209147 499 ntBASIC10.46□□□□□ -0.73
VcanQ62059 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
VcanQ62059 AC101205.2-201ENSMUST00000226206 715 ntBASIC10.46□□□□□ -0.73
VcanQ62059 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
VcanQ62059 Olfr1329-201ENSMUST00000071979 942 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
VcanQ62059 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
VcanQ62059 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
VcanQ62059 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
VcanQ62059 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
VcanQ62059 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.46□□□□□ -0.74
VcanQ62059 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
VcanQ62059 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
VcanQ62059 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
VcanQ62059 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
VcanQ62059 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC10.46□□□□□ -0.74
VcanQ62059 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
VcanQ62059 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.46□□□□□ -0.74
VcanQ62059 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
VcanQ62059 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.74
VcanQ62059 n-R5s154-201ENSMUST00000122513 108 ntBASIC10.46□□□□□ -0.74
VcanQ62059 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC10.46□□□□□ -0.74
VcanQ62059 AC122459.4-201ENSMUST00000228654 551 ntBASIC10.46□□□□□ -0.74
VcanQ62059 Gm25483-201ENSMUST00000083224 227 ntBASIC10.46□□□□□ -0.74
VcanQ62059 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
VcanQ62059 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
VcanQ62059 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
VcanQ62059 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
VcanQ62059 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
VcanQ62059 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
VcanQ62059 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
VcanQ62059 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
VcanQ62059 AC151836.1-201ENSMUST00000228730 1637 ntBASIC10.45□□□□□ -0.74
VcanQ62059 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
VcanQ62059 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VcanQ62059 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
VcanQ62059 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VcanQ62059 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
VcanQ62059 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
VcanQ62059 Ube2l3-203ENSMUST00000115700 571 ntTSL 5 BASIC10.45□□□□□ -0.74
VcanQ62059 Gm23479-201ENSMUST00000158876 122 ntBASIC10.45□□□□□ -0.74
VcanQ62059 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VcanQ62059 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
VcanQ62059 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC10.45□□□□□ -0.74
VcanQ62059 CT030195.2-201ENSMUST00000226074 1286 ntBASIC10.45□□□□□ -0.74
VcanQ62059 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VcanQ62059 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
VcanQ62059 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC10.45□□□□□ -0.74
VcanQ62059 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
VcanQ62059 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
VcanQ62059 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.45□□□□□ -0.74
VcanQ62059 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms