Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm4866-201ENSMUST00000197408 589 ntBASIC11.04□□□□□ -0.64
Col12a1Q60847 Crip1-206ENSMUST00000200553 516 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Col12a1Q60847 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC11.04□□□□□ -0.64
Col12a1Q60847 AC154435.1-201ENSMUST00000223938 959 ntBASIC11.04□□□□□ -0.64
Col12a1Q60847 AC163646.3-202ENSMUST00000228685 691 ntBASIC11.04□□□□□ -0.64
Col12a1Q60847 Gm10238-201ENSMUST00000089689 408 ntBASIC11.04□□□□□ -0.64
Col12a1Q60847 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC11.04□□□□□ -0.64
Col12a1Q60847 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col12a1Q60847 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col12a1Q60847 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col12a1Q60847 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC11.04□□□□□ -0.64
Col12a1Q60847 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Col12a1Q60847 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Col12a1Q60847 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col12a1Q60847 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col12a1Q60847 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col12a1Q60847 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col12a1Q60847 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC11.04□□□□□ -0.64
Col12a1Q60847 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col12a1Q60847 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC11.04□□□□□ -0.64
Col12a1Q60847 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col12a1Q60847 Gm45225-201ENSMUST00000206852 1139 ntBASIC11.04□□□□□ -0.64
Col12a1Q60847 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.04□□□□□ -0.64
Col12a1Q60847 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Col12a1Q60847 Slc25a14-208ENSMUST00000177710 1516 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col12a1Q60847 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Col12a1Q60847 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC11.03□□□□□ -0.64
Col12a1Q60847 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Olfml3-204ENSMUST00000169286 874 ntBASIC11.03□□□□□ -0.64
Col12a1Q60847 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Col12a1Q60847 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Col12a1Q60847 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Col12a1Q60847 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.03□□□□□ -0.64
Col12a1Q60847 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Col12a1Q60847 Gm15720-201ENSMUST00000117133 282 ntBASIC11.03□□□□□ -0.64
Col12a1Q60847 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Col12a1Q60847 Gm25154-201ENSMUST00000157123 119 ntBASIC11.03□□□□□ -0.64
Col12a1Q60847 Gm9574-201ENSMUST00000173127 845 ntBASIC11.03□□□□□ -0.64
Col12a1Q60847 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Col12a1Q60847 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Gm44658-201ENSMUST00000207965 637 ntBASIC11.03□□□□□ -0.64
Col12a1Q60847 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC11.03□□□□□ -0.64
Col12a1Q60847 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.03□□□□□ -0.64
Col12a1Q60847 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Col12a1Q60847 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col12a1Q60847 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.03□□□□□ -0.64
Col12a1Q60847 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.02□□□□□ -0.64
Col12a1Q60847 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Col12a1Q60847 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col12a1Q60847 Fthl17b-201ENSMUST00000105006 842 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Col12a1Q60847 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC11.02□□□□□ -0.64
Col12a1Q60847 Gm9133-201ENSMUST00000118289 540 ntBASIC11.02□□□□□ -0.64
Col12a1Q60847 Gm5845-201ENSMUST00000195812 796 ntBASIC11.02□□□□□ -0.64
Col12a1Q60847 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.02□□□□□ -0.64
Col12a1Q60847 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC11.02□□□□□ -0.64
Col12a1Q60847 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC11.02□□□□□ -0.64
Col12a1Q60847 Elobl-202ENSMUST00000082339 300 ntBASIC11.02□□□□□ -0.64
Col12a1Q60847 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col12a1Q60847 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Col12a1Q60847 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col12a1Q60847 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col12a1Q60847 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col12a1Q60847 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Col12a1Q60847 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col12a1Q60847 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col12a1Q60847 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col12a1Q60847 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Col12a1Q60847 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col12a1Q60847 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms