Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Gm1826-201ENSMUST00000118646 1162 ntBASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Gm43972-201ENSMUST00000181398 1467 ntBASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Gm23769-201ENSMUST00000104441 121 ntBASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Gm6758-201ENSMUST00000119643 1055 ntBASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Gm14052-201ENSMUST00000121434 1031 ntBASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Gm9625-201ENSMUST00000180422 955 ntBASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Gm29808-201ENSMUST00000194419 468 ntBASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 AC154537.1-201ENSMUST00000226101 1304 ntBASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Arhgef40Q3UPH7 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Gm44740-201ENSMUST00000205603 1614 ntBASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Gm18806-201ENSMUST00000207607 1775 ntBASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Gm13827-201ENSMUST00000148801 372 ntBASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Gm42751-201ENSMUST00000198065 559 ntBASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 AC167022.1-201ENSMUST00000218647 1458 ntBASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC16.64■□□□□ 0.25
Arhgef40Q3UPH7 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Arhgef40Q3UPH7 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC16.63■□□□□ 0.25
Arhgef40Q3UPH7 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Arhgef40Q3UPH7 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Arhgef40Q3UPH7 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Arhgef40Q3UPH7 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Arhgef40Q3UPH7 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Arhgef40Q3UPH7 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Arhgef40Q3UPH7 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Arhgef40Q3UPH7 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC16.63■□□□□ 0.25
Arhgef40Q3UPH7 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Arhgef40Q3UPH7 Gm11993-201ENSMUST00000121861 820 ntBASIC16.63■□□□□ 0.25
Arhgef40Q3UPH7 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Arhgef40Q3UPH7 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Arhgef40Q3UPH7 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Arhgef40Q3UPH7 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Arhgef40Q3UPH7 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Arhgef40Q3UPH7 Gm26119-201ENSMUST00000175601 104 ntBASIC16.63■□□□□ 0.25
Arhgef40Q3UPH7 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Arhgef40Q3UPH7 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms