Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Sf3b2Q3UJB0 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3b2Q3UJB0 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Sf3b2Q3UJB0 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3b2Q3UJB0 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3b2Q3UJB0 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3b2Q3UJB0 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3b2Q3UJB0 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3b2Q3UJB0 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Sf3b2Q3UJB0 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Sf3b2Q3UJB0 Gm44740-201ENSMUST00000205603 1614 ntBASIC14.88□□□□□ -0.03
Sf3b2Q3UJB0 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC14.88□□□□□ -0.03
Sf3b2Q3UJB0 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3b2Q3UJB0 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3b2Q3UJB0 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3b2Q3UJB0 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3b2Q3UJB0 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Gm38192-201ENSMUST00000194364 1847 ntBASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Sf3b2Q3UJB0 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Gm5308-201ENSMUST00000196752 1354 ntBASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Grk6-205ENSMUST00000224653 2976 ntBASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Gm12345-201ENSMUST00000119288 898 ntBASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Gm12009-201ENSMUST00000121361 1100 ntBASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Gm19013-201ENSMUST00000183895 1222 ntBASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Gm19014-201ENSMUST00000184828 1189 ntBASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Ighv5-8-202ENSMUST00000191967 337 ntBASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Wbp1-209ENSMUST00000205023 716 ntBASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms