Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Gm6082-201ENSMUST00000215204 454 ntBASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Gm11660-201ENSMUST00000120955 412 ntBASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Mir8093-201ENSMUST00000185043 137 ntBASIC12.19□□□□□ -0.46
Trim43aQ3TL54 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.19□□□□□ -0.46
Trim43aQ3TL54 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43aQ3TL54 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 AC207128.2-201ENSMUST00000223708 1924 ntBASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Gm15808-201ENSMUST00000119046 604 ntBASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Gm25890-201ENSMUST00000177643 165 ntBASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms