Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxc4Q08624 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.06□□□□□ -0.64
Hoxc4Q08624 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxc4Q08624 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.05□□□□□ -0.64
Hoxc4Q08624 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Hoxc4Q08624 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Gm37028-201ENSMUST00000194276 107 ntBASIC11.05□□□□□ -0.64
Hoxc4Q08624 Gm3726-201ENSMUST00000203110 785 ntBASIC11.05□□□□□ -0.64
Hoxc4Q08624 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Gm3619-201ENSMUST00000219947 775 ntBASIC11.05□□□□□ -0.64
Hoxc4Q08624 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxc4Q08624 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.04□□□□□ -0.64
Hoxc4Q08624 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.04□□□□□ -0.64
Hoxc4Q08624 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Gm14270-201ENSMUST00000118388 846 ntBASIC11.04□□□□□ -0.64
Hoxc4Q08624 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxc4Q08624 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.04□□□□□ -0.64
Hoxc4Q08624 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Gm9116-201ENSMUST00000192400 1018 ntBASIC11.04□□□□□ -0.64
Hoxc4Q08624 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.04□□□□□ -0.64
Hoxc4Q08624 Gm44323-201ENSMUST00000198689 129 ntBASIC11.04□□□□□ -0.64
Hoxc4Q08624 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Gm3793-201ENSMUST00000204973 672 ntBASIC11.04□□□□□ -0.64
Hoxc4Q08624 Gm5599-201ENSMUST00000209602 788 ntBASIC11.04□□□□□ -0.64
Hoxc4Q08624 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.04□□□□□ -0.64
Hoxc4Q08624 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxc4Q08624 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.04□□□□□ -0.64
Hoxc4Q08624 Btrc-209ENSMUST00000224478 2194 ntBASIC11.04□□□□□ -0.64
Hoxc4Q08624 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.04□□□□□ -0.64
Hoxc4Q08624 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms