Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 AC167202.1-201ENSMUST00000219027 331 ntBASIC11.73□□□□□ -0.53
Col9a1Q05722 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.73□□□□□ -0.53
Col9a1Q05722 CT025579.2-201ENSMUST00000225280 816 ntBASIC11.73□□□□□ -0.53
Col9a1Q05722 AC132833.4-201ENSMUST00000228313 203 ntBASIC11.73□□□□□ -0.53
Col9a1Q05722 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Col9a1Q05722 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Gm5705-201ENSMUST00000066241 711 ntBASIC11.73□□□□□ -0.53
Col9a1Q05722 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Col9a1Q05722 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Col9a1Q05722 Gm10145-201ENSMUST00000077776 462 ntBASIC11.73□□□□□ -0.53
Col9a1Q05722 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Gm10705-201ENSMUST00000098980 461 ntBASIC11.73□□□□□ -0.53
Col9a1Q05722 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Col9a1Q05722 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Col9a1Q05722 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a1Q05722 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a1Q05722 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.72□□□□□ -0.53
Col9a1Q05722 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a1Q05722 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a1Q05722 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.72□□□□□ -0.53
Col9a1Q05722 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a1Q05722 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a1Q05722 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a1Q05722 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a1Q05722 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Col9a1Q05722 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.72□□□□□ -0.53
Col9a1Q05722 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a1Q05722 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a1Q05722 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a1Q05722 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a1Q05722 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a1Q05722 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Col9a1Q05722 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.72□□□□□ -0.53
Col9a1Q05722 Gm44843-201ENSMUST00000208320 1396 ntBASIC11.72□□□□□ -0.53
Col9a1Q05722 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Col9a1Q05722 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC11.72□□□□□ -0.53
Col9a1Q05722 Gm15754-201ENSMUST00000119191 478 ntBASIC11.72□□□□□ -0.53
Col9a1Q05722 Nsa2-ps2-201ENSMUST00000120785 773 ntBASIC11.72□□□□□ -0.53
Col9a1Q05722 Gm14639-201ENSMUST00000120850 866 ntBASIC11.72□□□□□ -0.53
Col9a1Q05722 Gm6451-201ENSMUST00000121488 717 ntBASIC11.72□□□□□ -0.53
Col9a1Q05722 Gm14840-201ENSMUST00000122135 594 ntBASIC11.72□□□□□ -0.53
Col9a1Q05722 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.72□□□□□ -0.53
Col9a1Q05722 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC11.72□□□□□ -0.53
Col9a1Q05722 Gm26313-201ENSMUST00000157770 308 ntBASIC11.72□□□□□ -0.53
Col9a1Q05722 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC11.72□□□□□ -0.53
Col9a1Q05722 Gm18358-201ENSMUST00000173179 1277 ntBASIC11.72□□□□□ -0.53
Col9a1Q05722 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC11.72□□□□□ -0.53
Col9a1Q05722 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a1Q05722 1700083H02Rik-201ENSMUST00000190526 637 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a1Q05722 Gm32102-201ENSMUST00000196885 241 ntBASIC11.72□□□□□ -0.53
Col9a1Q05722 Gm44585-201ENSMUST00000207150 607 ntBASIC11.72□□□□□ -0.53
Col9a1Q05722 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC11.72□□□□□ -0.53
Col9a1Q05722 Gm39288-201ENSMUST00000210554 446 ntBASIC11.72□□□□□ -0.53
Col9a1Q05722 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.72□□□□□ -0.53
Col9a1Q05722 Platr25-206ENSMUST00000222303 1171 ntTSL 5 BASIC11.72□□□□□ -0.53
Col9a1Q05722 AC167192.4-201ENSMUST00000224087 993 ntBASIC11.72□□□□□ -0.53
Col9a1Q05722 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a1Q05722 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a1Q05722 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Col9a1Q05722 Olfr1189-201ENSMUST00000090700 921 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Col9a1Q05722 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Col9a1Q05722 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a1Q05722 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.72□□□□□ -0.53
Col9a1Q05722 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Col9a1Q05722 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a1Q05722 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a1Q05722 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a1Q05722 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a1Q05722 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a1Q05722 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a1Q05722 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a1Q05722 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Col9a1Q05722 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a1Q05722 Gm45719-201ENSMUST00000207954 1662 ntBASIC11.71□□□□□ -0.53
Col9a1Q05722 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Col9a1Q05722 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC11.71□□□□□ -0.53
Col9a1Q05722 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.71□□□□□ -0.53
Col9a1Q05722 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Col9a1Q05722 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.71□□□□□ -0.53
Col9a1Q05722 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a1Q05722 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Col9a1Q05722 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.71□□□□□ -0.53
Col9a1Q05722 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a1Q05722 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Col9a1Q05722 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a1Q05722 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms