Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcc1P97496 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Smarcc1P97496 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Smarcc1P97496 Gm29067-201ENSMUST00000190821 470 ntBASIC14.4□□□□□ -0.1
Smarcc1P97496 Gm37782-201ENSMUST00000194879 678 ntBASIC14.4□□□□□ -0.1
Smarcc1P97496 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcc1P97496 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Smarcc1P97496 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Smarcc1P97496 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcc1P97496 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcc1P97496 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcc1P97496 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcc1P97496 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcc1P97496 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcc1P97496 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcc1P97496 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Smarcc1P97496 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcc1P97496 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcc1P97496 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcc1P97496 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcc1P97496 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC14.4□□□□□ -0.1
Smarcc1P97496 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcc1P97496 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC14.39□□□□□ -0.11
Smarcc1P97496 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC14.39□□□□□ -0.11
Smarcc1P97496 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcc1P97496 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcc1P97496 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.39□□□□□ -0.11
Smarcc1P97496 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcc1P97496 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcc1P97496 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.39□□□□□ -0.11
Smarcc1P97496 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Smarcc1P97496 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Smarcc1P97496 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcc1P97496 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcc1P97496 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcc1P97496 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcc1P97496 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcc1P97496 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC14.39□□□□□ -0.11
Smarcc1P97496 Gm13039-201ENSMUST00000118638 794 ntBASIC14.39□□□□□ -0.11
Smarcc1P97496 Gm13981-201ENSMUST00000122360 447 ntBASIC14.39□□□□□ -0.11
Smarcc1P97496 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC14.39□□□□□ -0.11
Smarcc1P97496 Gm25226-201ENSMUST00000158198 123 ntBASIC14.39□□□□□ -0.11
Smarcc1P97496 Gm24328-201ENSMUST00000175104 67 ntBASIC14.39□□□□□ -0.11
Smarcc1P97496 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Smarcc1P97496 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC14.39□□□□□ -0.11
Smarcc1P97496 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcc1P97496 Gm18065-201ENSMUST00000221395 526 ntBASIC14.39□□□□□ -0.11
Smarcc1P97496 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC14.39□□□□□ -0.11
Smarcc1P97496 CT030652.1-201ENSMUST00000227377 1235 ntBASIC14.39□□□□□ -0.11
Smarcc1P97496 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC14.39□□□□□ -0.11
Smarcc1P97496 Gm9791-201ENSMUST00000060997 447 ntBASIC14.39□□□□□ -0.11
Smarcc1P97496 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Smarcc1P97496 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Smarcc1P97496 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Smarcc1P97496 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcc1P97496 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcc1P97496 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcc1P97496 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcc1P97496 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcc1P97496 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcc1P97496 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcc1P97496 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcc1P97496 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcc1P97496 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Smarcc1P97496 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC14.38□□□□□ -0.11
Smarcc1P97496 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc1P97496 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc1P97496 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc1P97496 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc1P97496 AC174797.1-201ENSMUST00000224339 1649 ntBASIC14.38□□□□□ -0.11
Smarcc1P97496 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc1P97496 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc1P97496 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Smarcc1P97496 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc1P97496 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc1P97496 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Smarcc1P97496 Gm13284-201ENSMUST00000121020 547 ntBASIC14.38□□□□□ -0.11
Smarcc1P97496 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc1P97496 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc1P97496 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC14.38□□□□□ -0.11
Smarcc1P97496 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC14.38□□□□□ -0.11
Smarcc1P97496 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc1P97496 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC14.38□□□□□ -0.11
Smarcc1P97496 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Smarcc1P97496 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc1P97496 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc1P97496 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc1P97496 Gm44814-201ENSMUST00000207018 434 ntBASIC14.38□□□□□ -0.11
Smarcc1P97496 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc1P97496 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc1P97496 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc1P97496 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
Smarcc1P97496 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.38□□□□□ -0.11
Smarcc1P97496 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC14.38□□□□□ -0.11
Smarcc1P97496 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc1P97496 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc1P97496 Gm44106-201ENSMUST00000203153 1599 ntBASIC14.38□□□□□ -0.11
Smarcc1P97496 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc1P97496 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc1P97496 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms