Protein–RNA interactions for Protein: P80205

Otx1, Homeobox protein OTX1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx1P80205 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC9.95□□□□□ -0.82
Otx1P80205 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Otx1P80205 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Otx1P80205 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Otx1P80205 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Otx1P80205 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Otx1P80205 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC9.95□□□□□ -0.82
Otx1P80205 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Otx1P80205 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Otx1P80205 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Otx1P80205 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Otx1P80205 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Otx1P80205 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Otx1P80205 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Otx1P80205 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Otx1P80205 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Otx1P80205 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Otx1P80205 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Otx1P80205 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Otx1P80205 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Otx1P80205 Gm45677-201ENSMUST00000209975 1341 ntBASIC9.94□□□□□ -0.82
Otx1P80205 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC9.94□□□□□ -0.82
Otx1P80205 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC9.94□□□□□ -0.82
Otx1P80205 Gm13611-201ENSMUST00000118269 318 ntBASIC9.94□□□□□ -0.82
Otx1P80205 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC9.94□□□□□ -0.82
Otx1P80205 Gm7150-201ENSMUST00000122032 981 ntBASIC9.94□□□□□ -0.82
Otx1P80205 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC9.94□□□□□ -0.82
Otx1P80205 Gm23699-201ENSMUST00000158835 135 ntBASIC9.94□□□□□ -0.82
Otx1P80205 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC9.94□□□□□ -0.82
Otx1P80205 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC9.94□□□□□ -0.82
Otx1P80205 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC9.94□□□□□ -0.82
Otx1P80205 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC9.94□□□□□ -0.82
Otx1P80205 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC9.94□□□□□ -0.82
Otx1P80205 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC9.94□□□□□ -0.82
Otx1P80205 Gm29499-201ENSMUST00000189151 486 ntBASIC9.94□□□□□ -0.82
Otx1P80205 Gm28329-201ENSMUST00000191208 689 ntBASIC9.94□□□□□ -0.82
Otx1P80205 Gm29171-201ENSMUST00000191397 486 ntBASIC9.94□□□□□ -0.82
Otx1P80205 Gm42682-201ENSMUST00000198349 1265 ntBASIC9.94□□□□□ -0.82
Otx1P80205 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Otx1P80205 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Otx1P80205 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC9.94□□□□□ -0.82
Otx1P80205 Gm5369-201ENSMUST00000217499 588 ntBASIC9.94□□□□□ -0.82
Otx1P80205 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC9.94□□□□□ -0.82
Otx1P80205 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC9.94□□□□□ -0.82
Otx1P80205 AC164437.3-201ENSMUST00000228323 347 ntBASIC9.94□□□□□ -0.82
Otx1P80205 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Otx1P80205 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Otx1P80205 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Otx1P80205 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Otx1P80205 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Otx1P80205 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
Otx1P80205 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Otx1P80205 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Otx1P80205 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Otx1P80205 Gm38055-201ENSMUST00000195353 2217 ntBASIC9.94□□□□□ -0.82
Otx1P80205 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Otx1P80205 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Otx1P80205 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Otx1P80205 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
Otx1P80205 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Otx1P80205 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Otx1P80205 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Otx1P80205 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Otx1P80205 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Otx1P80205 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC9.93□□□□□ -0.82
Otx1P80205 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Otx1P80205 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Otx1P80205 CT010447.1-201ENSMUST00000225657 1608 ntBASIC9.93□□□□□ -0.82
Otx1P80205 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC9.93□□□□□ -0.82
Otx1P80205 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Otx1P80205 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Otx1P80205 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9.93□□□□□ -0.82
Otx1P80205 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Otx1P80205 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Otx1P80205 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Otx1P80205 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Otx1P80205 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Otx1P80205 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Otx1P80205 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Otx1P80205 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Otx1P80205 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Otx1P80205 Gm14058-201ENSMUST00000116082 735 ntBASIC9.93□□□□□ -0.82
Otx1P80205 Gm8731-201ENSMUST00000118088 412 ntBASIC9.93□□□□□ -0.82
Otx1P80205 Gm15595-201ENSMUST00000120840 961 ntBASIC9.93□□□□□ -0.82
Otx1P80205 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Otx1P80205 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Otx1P80205 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC9.93□□□□□ -0.82
Otx1P80205 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Otx1P80205 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC9.93□□□□□ -0.82
Otx1P80205 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Otx1P80205 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC9.93□□□□□ -0.82
Otx1P80205 Gm44008-201ENSMUST00000204345 412 ntBASIC9.93□□□□□ -0.82
Otx1P80205 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC9.93□□□□□ -0.82
Otx1P80205 Gm7848-201ENSMUST00000210739 718 ntBASIC9.93□□□□□ -0.82
Otx1P80205 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC9.93□□□□□ -0.82
Otx1P80205 CT009713.8-201ENSMUST00000225448 560 ntBASIC9.93□□□□□ -0.82
Otx1P80205 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Otx1P80205 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Otx1P80205 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Otx1P80205 Gm10702-201ENSMUST00000098929 1268 ntBASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms