Protein–RNA interactions for Protein: P70255

Nfic, Nuclear factor 1 C-type, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NficP70255 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
NficP70255 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
NficP70255 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
NficP70255 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.32□□□□□ -0.6
NficP70255 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 Gm15808-201ENSMUST00000119046 604 ntBASIC11.32□□□□□ -0.6
NficP70255 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.32□□□□□ -0.6
NficP70255 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.32□□□□□ -0.6
NficP70255 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
NficP70255 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
NficP70255 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
NficP70255 Gm5982-201ENSMUST00000196234 512 ntBASIC11.32□□□□□ -0.6
NficP70255 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.32□□□□□ -0.6
NficP70255 Gm18730-201ENSMUST00000218038 343 ntBASIC11.32□□□□□ -0.6
NficP70255 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
NficP70255 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
NficP70255 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
NficP70255 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.32□□□□□ -0.6
NficP70255 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.32□□□□□ -0.6
NficP70255 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
NficP70255 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NficP70255 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.31□□□□□ -0.6
NficP70255 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NficP70255 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NficP70255 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.31□□□□□ -0.6
NficP70255 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
NficP70255 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
NficP70255 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
NficP70255 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NficP70255 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NficP70255 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
NficP70255 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NficP70255 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
NficP70255 Gm11663-201ENSMUST00000117888 290 ntBASIC11.31□□□□□ -0.6
NficP70255 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.31□□□□□ -0.6
NficP70255 Gm11434-201ENSMUST00000122379 629 ntBASIC11.31□□□□□ -0.6
NficP70255 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.31□□□□□ -0.6
NficP70255 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NficP70255 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.31□□□□□ -0.6
NficP70255 Mir8093-201ENSMUST00000185043 137 ntBASIC11.31□□□□□ -0.6
NficP70255 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC11.31□□□□□ -0.6
NficP70255 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NficP70255 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
NficP70255 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.31□□□□□ -0.6
NficP70255 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.31□□□□□ -0.6
NficP70255 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.31□□□□□ -0.6
NficP70255 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
NficP70255 Gm8420-201ENSMUST00000097103 598 ntBASIC11.31□□□□□ -0.6
NficP70255 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NficP70255 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NficP70255 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NficP70255 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
NficP70255 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NficP70255 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NficP70255 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NficP70255 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.31□□□□□ -0.6
NficP70255 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NficP70255 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
NficP70255 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NficP70255 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
NficP70255 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.31□□□□□ -0.6
NficP70255 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NficP70255 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NficP70255 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NficP70255 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NficP70255 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NficP70255 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
NficP70255 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NficP70255 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NficP70255 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
NficP70255 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.3□□□□□ -0.6
NficP70255 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms