Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Hmgb1P63158 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmgb1P63158 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmgb1P63158 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmgb1P63158 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Hmgb1P63158 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Hmgb1P63158 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgb1P63158 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgb1P63158 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgb1P63158 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Hmgb1P63158 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Hmgb1P63158 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgb1P63158 Bbs7-202ENSMUST00000108155 2437 ntTSL 5 BASIC12.7□□□□□ -0.38
Hmgb1P63158 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgb1P63158 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC12.7□□□□□ -0.38
Hmgb1P63158 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgb1P63158 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.7□□□□□ -0.38
Hmgb1P63158 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgb1P63158 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgb1P63158 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgb1P63158 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgb1P63158 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgb1P63158 Gm15198-201ENSMUST00000117283 177 ntBASIC12.7□□□□□ -0.38
Hmgb1P63158 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.7□□□□□ -0.38
Hmgb1P63158 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
Hmgb1P63158 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgb1P63158 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.7□□□□□ -0.38
Hmgb1P63158 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgb1P63158 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.7□□□□□ -0.38
Hmgb1P63158 Gm43179-201ENSMUST00000198797 275 ntBASIC12.7□□□□□ -0.38
Hmgb1P63158 Gm45433-201ENSMUST00000209386 247 ntBASIC12.7□□□□□ -0.38
Hmgb1P63158 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.7□□□□□ -0.38
Hmgb1P63158 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgb1P63158 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Hmgb1P63158 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.7□□□□□ -0.38
Hmgb1P63158 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgb1P63158 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Hmgb1P63158 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgb1P63158 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgb1P63158 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgb1P63158 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgb1P63158 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Hmgb1P63158 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
Hmgb1P63158 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgb1P63158 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgb1P63158 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgb1P63158 Gm16551-203ENSMUST00000160979 3162 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgb1P63158 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgb1P63158 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgb1P63158 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.7□□□□□ -0.38
Hmgb1P63158 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgb1P63158 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgb1P63158 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgb1P63158 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Hmgb1P63158 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgb1P63158 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgb1P63158 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.69□□□□□ -0.38
Hmgb1P63158 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgb1P63158 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.69□□□□□ -0.38
Hmgb1P63158 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgb1P63158 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.69□□□□□ -0.38
Hmgb1P63158 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgb1P63158 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgb1P63158 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgb1P63158 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgb1P63158 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hmgb1P63158 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hmgb1P63158 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgb1P63158 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgb1P63158 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgb1P63158 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Hmgb1P63158 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Hmgb1P63158 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.69□□□□□ -0.38
Hmgb1P63158 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgb1P63158 Gm12857-201ENSMUST00000117678 592 ntBASIC12.69□□□□□ -0.38
Hmgb1P63158 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.69□□□□□ -0.38
Hmgb1P63158 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.69□□□□□ -0.38
Hmgb1P63158 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.69□□□□□ -0.38
Hmgb1P63158 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgb1P63158 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgb1P63158 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgb1P63158 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.69□□□□□ -0.38
Hmgb1P63158 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgb1P63158 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgb1P63158 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgb1P63158 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgb1P63158 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hmgb1P63158 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgb1P63158 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Hmgb1P63158 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgb1P63158 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Hmgb1P63158 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.69□□□□□ -0.38
Hmgb1P63158 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgb1P63158 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgb1P63158 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Hmgb1P63158 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgb1P63158 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgb1P63158 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgb1P63158 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgb1P63158 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms