Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lim2P56563 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.49□□□□□ -0.57
Lim2P56563 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lim2P56563 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lim2P56563 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lim2P56563 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.49□□□□□ -0.57
Lim2P56563 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lim2P56563 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lim2P56563 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lim2P56563 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lim2P56563 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lim2P56563 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lim2P56563 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Lim2P56563 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lim2P56563 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Lim2P56563 Gm22711-201ENSMUST00000116890 133 ntBASIC11.49□□□□□ -0.57
Lim2P56563 Gm15352-201ENSMUST00000118696 270 ntBASIC11.49□□□□□ -0.57
Lim2P56563 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.49□□□□□ -0.57
Lim2P56563 Gm7150-201ENSMUST00000122032 981 ntBASIC11.49□□□□□ -0.57
Lim2P56563 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.49□□□□□ -0.57
Lim2P56563 Gm4726-201ENSMUST00000135604 736 ntBASIC11.49□□□□□ -0.57
Lim2P56563 Gm6019-201ENSMUST00000148369 736 ntBASIC11.49□□□□□ -0.57
Lim2P56563 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lim2P56563 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.49□□□□□ -0.57
Lim2P56563 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.49□□□□□ -0.57
Lim2P56563 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lim2P56563 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lim2P56563 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lim2P56563 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.49□□□□□ -0.57
Lim2P56563 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.49□□□□□ -0.57
Lim2P56563 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lim2P56563 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Lim2P56563 Gm4978-201ENSMUST00000071565 801 ntBASIC11.49□□□□□ -0.57
Lim2P56563 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Lim2P56563 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lim2P56563 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Lim2P56563 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lim2P56563 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lim2P56563 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.49□□□□□ -0.57
Lim2P56563 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.49□□□□□ -0.57
Lim2P56563 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.49□□□□□ -0.57
Lim2P56563 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lim2P56563 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Lim2P56563 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lim2P56563 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lim2P56563 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lim2P56563 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lim2P56563 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lim2P56563 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.49□□□□□ -0.57
Lim2P56563 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lim2P56563 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lim2P56563 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.49□□□□□ -0.57
Lim2P56563 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Lim2P56563 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.49□□□□□ -0.57
Lim2P56563 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lim2P56563 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lim2P56563 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lim2P56563 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lim2P56563 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lim2P56563 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lim2P56563 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lim2P56563 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lim2P56563 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lim2P56563 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lim2P56563 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lim2P56563 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lim2P56563 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lim2P56563 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lim2P56563 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lim2P56563 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lim2P56563 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lim2P56563 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.48□□□□□ -0.57
Lim2P56563 Mir1943-201ENSMUST00000158276 73 ntBASIC11.48□□□□□ -0.57
Lim2P56563 Gm22902-201ENSMUST00000158488 302 ntBASIC11.48□□□□□ -0.57
Lim2P56563 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Lim2P56563 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.48□□□□□ -0.57
Lim2P56563 Gm3786-201ENSMUST00000202659 378 ntBASIC11.48□□□□□ -0.57
Lim2P56563 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.48□□□□□ -0.57
Lim2P56563 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lim2P56563 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lim2P56563 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lim2P56563 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Lim2P56563 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lim2P56563 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Lim2P56563 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lim2P56563 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lim2P56563 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Lim2P56563 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lim2P56563 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.48□□□□□ -0.57
Lim2P56563 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lim2P56563 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lim2P56563 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Lim2P56563 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lim2P56563 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lim2P56563 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lim2P56563 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lim2P56563 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lim2P56563 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.47□□□□□ -0.57
Lim2P56563 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lim2P56563 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms