Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC12.11□□□□□ -0.47
NcanP55066 Gm27149-201ENSMUST00000184716 1266 ntBASIC12.11□□□□□ -0.47
NcanP55066 Gm9523-201ENSMUST00000199146 1159 ntBASIC12.11□□□□□ -0.47
NcanP55066 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC12.11□□□□□ -0.47
NcanP55066 Gm43460-201ENSMUST00000202491 1057 ntBASIC12.11□□□□□ -0.47
NcanP55066 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NcanP55066 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
NcanP55066 Gm31763-201ENSMUST00000217788 673 ntTSL 3 BASIC12.11□□□□□ -0.47
NcanP55066 AC154589.2-201ENSMUST00000228847 251 ntBASIC12.11□□□□□ -0.47
NcanP55066 Gm8615-201ENSMUST00000025307 771 ntBASIC12.11□□□□□ -0.47
NcanP55066 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NcanP55066 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
NcanP55066 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
NcanP55066 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NcanP55066 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NcanP55066 Gm38192-201ENSMUST00000194364 1847 ntBASIC12.11□□□□□ -0.47
NcanP55066 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NcanP55066 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NcanP55066 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NcanP55066 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NcanP55066 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NcanP55066 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.11□□□□□ -0.47
NcanP55066 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NcanP55066 Gm7405-201ENSMUST00000121476 1337 ntBASIC12.11□□□□□ -0.47
NcanP55066 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
NcanP55066 Gm17836-201ENSMUST00000191976 1302 ntBASIC12.11□□□□□ -0.47
NcanP55066 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NcanP55066 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NcanP55066 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NcanP55066 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NcanP55066 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NcanP55066 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NcanP55066 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
NcanP55066 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NcanP55066 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NcanP55066 Gm24933-201ENSMUST00000103762 110 ntBASIC12.1□□□□□ -0.47
NcanP55066 Gm23252-201ENSMUST00000103776 110 ntBASIC12.1□□□□□ -0.47
NcanP55066 Fthl17b-201ENSMUST00000105006 842 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
NcanP55066 Gm14829-201ENSMUST00000121499 1138 ntBASIC12.1□□□□□ -0.47
NcanP55066 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
NcanP55066 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC12.1□□□□□ -0.47
NcanP55066 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
NcanP55066 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC12.1□□□□□ -0.47
NcanP55066 Gm26443-201ENSMUST00000179610 110 ntBASIC12.1□□□□□ -0.47
NcanP55066 Gm7928-201ENSMUST00000181249 701 ntBASIC12.1□□□□□ -0.47
NcanP55066 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.1□□□□□ -0.47
NcanP55066 Gm5254-201ENSMUST00000188353 977 ntBASIC12.1□□□□□ -0.47
NcanP55066 Ints5-203ENSMUST00000191089 568 ntTSL 5 BASIC12.1□□□□□ -0.47
NcanP55066 Gm43966-201ENSMUST00000203301 612 ntBASIC12.1□□□□□ -0.47
NcanP55066 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC12.1□□□□□ -0.47
NcanP55066 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
NcanP55066 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NcanP55066 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NcanP55066 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NcanP55066 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.1□□□□□ -0.47
NcanP55066 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NcanP55066 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
NcanP55066 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NcanP55066 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NcanP55066 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NcanP55066 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.1□□□□□ -0.47
NcanP55066 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
NcanP55066 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NcanP55066 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NcanP55066 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.09□□□□□ -0.47
NcanP55066 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
NcanP55066 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
NcanP55066 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.09□□□□□ -0.47
NcanP55066 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
NcanP55066 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 Gm44740-201ENSMUST00000205603 1614 ntBASIC12.09□□□□□ -0.47
NcanP55066 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 Gm13426-201ENSMUST00000117887 795 ntBASIC12.09□□□□□ -0.47
NcanP55066 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC12.09□□□□□ -0.47
NcanP55066 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC12.09□□□□□ -0.47
NcanP55066 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.09□□□□□ -0.47
NcanP55066 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.09□□□□□ -0.47
NcanP55066 Gm27444-201ENSMUST00000184157 137 ntBASIC12.09□□□□□ -0.47
NcanP55066 Gm42687-201ENSMUST00000199075 164 ntBASIC12.09□□□□□ -0.47
NcanP55066 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC12.09□□□□□ -0.47
NcanP55066 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
NcanP55066 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
NcanP55066 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC12.09□□□□□ -0.47
NcanP55066 AL844586.1-201ENSMUST00000224297 1042 ntBASIC12.09□□□□□ -0.47
NcanP55066 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
NcanP55066 AC154407.1-201ENSMUST00000226777 526 ntBASIC12.09□□□□□ -0.47
NcanP55066 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms