Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.8□□□□□ -0.52
Sox1P53783 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox1P53783 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox1P53783 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Sox1P53783 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox1P53783 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Sox1P53783 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox1P53783 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Sox1P53783 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox1P53783 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox1P53783 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox1P53783 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox1P53783 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Sox1P53783 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox1P53783 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox1P53783 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox1P53783 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox1P53783 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox1P53783 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox1P53783 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Sox1P53783 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox1P53783 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox1P53783 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox1P53783 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox1P53783 Mir1190-201ENSMUST00000116925 96 ntBASIC11.79□□□□□ -0.52
Sox1P53783 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Sox1P53783 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC11.79□□□□□ -0.52
Sox1P53783 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox1P53783 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Sox1P53783 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC11.79□□□□□ -0.52
Sox1P53783 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11.79□□□□□ -0.52
Sox1P53783 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.79□□□□□ -0.52
Sox1P53783 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox1P53783 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox1P53783 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC11.79□□□□□ -0.52
Sox1P53783 CT571271.1-201ENSMUST00000227071 670 ntBASIC11.79□□□□□ -0.52
Sox1P53783 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC11.79□□□□□ -0.52
Sox1P53783 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox1P53783 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Sox1P53783 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox1P53783 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox1P53783 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC11.79□□□□□ -0.52
Sox1P53783 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox1P53783 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.79□□□□□ -0.52
Sox1P53783 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Sox1P53783 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox1P53783 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.79□□□□□ -0.52
Sox1P53783 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox1P53783 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Sox1P53783 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox1P53783 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox1P53783 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Sox1P53783 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.78□□□□□ -0.52
Sox1P53783 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox1P53783 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox1P53783 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox1P53783 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.78□□□□□ -0.52
Sox1P53783 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox1P53783 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sox1P53783 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox1P53783 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox1P53783 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Sox1P53783 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox1P53783 Mir1249-201ENSMUST00000116791 98 ntBASIC11.78□□□□□ -0.52
Sox1P53783 Gm13899-201ENSMUST00000121519 1255 ntBASIC11.78□□□□□ -0.52
Sox1P53783 Defa-ps16-201ENSMUST00000121939 171 ntBASIC11.78□□□□□ -0.52
Sox1P53783 Gm24140-201ENSMUST00000122773 326 ntBASIC11.78□□□□□ -0.52
Sox1P53783 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox1P53783 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC11.78□□□□□ -0.52
Sox1P53783 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox1P53783 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox1P53783 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox1P53783 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox1P53783 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.78□□□□□ -0.52
Sox1P53783 Gm43377-201ENSMUST00000201640 455 ntBASIC11.78□□□□□ -0.52
Sox1P53783 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox1P53783 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox1P53783 AC241616.1-201ENSMUST00000213741 166 ntBASIC11.78□□□□□ -0.52
Sox1P53783 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox1P53783 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox1P53783 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.78□□□□□ -0.52
Sox1P53783 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox1P53783 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.78□□□□□ -0.52
Sox1P53783 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.78□□□□□ -0.52
Sox1P53783 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox1P53783 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox1P53783 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox1P53783 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sox1P53783 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox1P53783 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox1P53783 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Sox1P53783 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.78□□□□□ -0.52
Sox1P53783 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox1P53783 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox1P53783 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox1P53783 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox1P53783 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox1P53783 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Sox1P53783 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.77□□□□□ -0.52
Sox1P53783 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms