Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Lhx3P50481 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lhx3P50481 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lhx3P50481 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.64□□□□□ -0.55
Lhx3P50481 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.63□□□□□ -0.55
Lhx3P50481 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx3P50481 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx3P50481 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx3P50481 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.63□□□□□ -0.55
Lhx3P50481 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx3P50481 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx3P50481 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx3P50481 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx3P50481 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx3P50481 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Lhx3P50481 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Lhx3P50481 Mir7051-201ENSMUST00000184167 73 ntBASIC11.63□□□□□ -0.55
Lhx3P50481 Gm37284-201ENSMUST00000193607 539 ntBASIC11.63□□□□□ -0.55
Lhx3P50481 Gm44329-201ENSMUST00000197469 112 ntBASIC11.63□□□□□ -0.55
Lhx3P50481 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx3P50481 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.63□□□□□ -0.55
Lhx3P50481 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.63□□□□□ -0.55
Lhx3P50481 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.63□□□□□ -0.55
Lhx3P50481 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.63□□□□□ -0.55
Lhx3P50481 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.63□□□□□ -0.55
Lhx3P50481 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.63□□□□□ -0.55
Lhx3P50481 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx3P50481 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx3P50481 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx3P50481 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
Lhx3P50481 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx3P50481 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.63□□□□□ -0.55
Lhx3P50481 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx3P50481 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx3P50481 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Lhx3P50481 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx3P50481 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx3P50481 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx3P50481 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Lhx3P50481 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx3P50481 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx3P50481 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.63□□□□□ -0.55
Lhx3P50481 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx3P50481 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx3P50481 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.63□□□□□ -0.55
Lhx3P50481 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx3P50481 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx3P50481 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx3P50481 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx3P50481 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx3P50481 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx3P50481 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx3P50481 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx3P50481 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.62□□□□□ -0.55
Lhx3P50481 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Lhx3P50481 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx3P50481 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.62□□□□□ -0.55
Lhx3P50481 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.62□□□□□ -0.55
Lhx3P50481 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx3P50481 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.62□□□□□ -0.55
Lhx3P50481 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx3P50481 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx3P50481 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx3P50481 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Lhx3P50481 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.62□□□□□ -0.55
Lhx3P50481 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.62□□□□□ -0.55
Lhx3P50481 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx3P50481 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.62□□□□□ -0.55
Lhx3P50481 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.62□□□□□ -0.55
Lhx3P50481 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.62□□□□□ -0.55
Lhx3P50481 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx3P50481 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx3P50481 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx3P50481 Gm24992-201ENSMUST00000157412 130 ntBASIC11.62□□□□□ -0.55
Lhx3P50481 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx3P50481 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.62□□□□□ -0.55
Lhx3P50481 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.62□□□□□ -0.55
Lhx3P50481 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.62□□□□□ -0.55
Lhx3P50481 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.62□□□□□ -0.55
Lhx3P50481 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Lhx3P50481 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Lhx3P50481 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx3P50481 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.62□□□□□ -0.55
Lhx3P50481 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx3P50481 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Lhx3P50481 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx3P50481 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx3P50481 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx3P50481 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx3P50481 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
Lhx3P50481 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx3P50481 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx3P50481 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx3P50481 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx3P50481 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.62□□□□□ -0.55
Lhx3P50481 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lhx3P50481 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lhx3P50481 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Lhx3P50481 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lhx3P50481 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms