Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SftpbP50405 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SftpbP50405 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.73□□□□□ -0.53
SftpbP50405 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SftpbP50405 Gm11509-201ENSMUST00000117358 325 ntBASIC11.73□□□□□ -0.53
SftpbP50405 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
SftpbP50405 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SftpbP50405 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SftpbP50405 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
SftpbP50405 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SftpbP50405 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
SftpbP50405 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SftpbP50405 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SftpbP50405 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SftpbP50405 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.73□□□□□ -0.53
SftpbP50405 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.73□□□□□ -0.53
SftpbP50405 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.73□□□□□ -0.53
SftpbP50405 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.73□□□□□ -0.53
SftpbP50405 Gm5982-201ENSMUST00000196234 512 ntBASIC11.73□□□□□ -0.53
SftpbP50405 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SftpbP50405 Gm43758-201ENSMUST00000199500 367 ntBASIC11.73□□□□□ -0.53
SftpbP50405 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SftpbP50405 Gm17812-201ENSMUST00000204935 318 ntBASIC11.73□□□□□ -0.53
SftpbP50405 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SftpbP50405 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.73□□□□□ -0.53
SftpbP50405 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SftpbP50405 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.73□□□□□ -0.53
SftpbP50405 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.73□□□□□ -0.53
SftpbP50405 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SftpbP50405 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SftpbP50405 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SftpbP50405 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SftpbP50405 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SftpbP50405 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SftpbP50405 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SftpbP50405 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SftpbP50405 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SftpbP50405 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.73□□□□□ -0.53
SftpbP50405 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SftpbP50405 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SftpbP50405 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SftpbP50405 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SftpbP50405 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SftpbP50405 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
SftpbP50405 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SftpbP50405 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.72□□□□□ -0.53
SftpbP50405 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SftpbP50405 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
SftpbP50405 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
SftpbP50405 Gm11500-201ENSMUST00000118237 601 ntBASIC11.72□□□□□ -0.53
SftpbP50405 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.72□□□□□ -0.53
SftpbP50405 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SftpbP50405 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SftpbP50405 Gm20482-202ENSMUST00000174729 825 ntBASIC11.72□□□□□ -0.53
SftpbP50405 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.72□□□□□ -0.53
SftpbP50405 Gm27627-201ENSMUST00000183644 150 ntBASIC11.72□□□□□ -0.53
SftpbP50405 Mir8093-201ENSMUST00000185043 137 ntBASIC11.72□□□□□ -0.53
SftpbP50405 Gm28686-201ENSMUST00000187404 609 ntBASIC11.72□□□□□ -0.53
SftpbP50405 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.72□□□□□ -0.53
SftpbP50405 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SftpbP50405 Gm13097-201ENSMUST00000210722 397 ntBASIC11.72□□□□□ -0.53
SftpbP50405 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.72□□□□□ -0.53
SftpbP50405 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.72□□□□□ -0.53
SftpbP50405 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SftpbP50405 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.72□□□□□ -0.53
SftpbP50405 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
SftpbP50405 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SftpbP50405 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SftpbP50405 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SftpbP50405 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.72□□□□□ -0.53
SftpbP50405 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SftpbP50405 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SftpbP50405 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SftpbP50405 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SftpbP50405 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SftpbP50405 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SftpbP50405 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SftpbP50405 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SftpbP50405 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SftpbP50405 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SftpbP50405 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SftpbP50405 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
SftpbP50405 BC043934-202ENSMUST00000185694 2356 ntBASIC11.71□□□□□ -0.53
SftpbP50405 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
SftpbP50405 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SftpbP50405 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
SftpbP50405 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SftpbP50405 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SftpbP50405 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.71□□□□□ -0.53
SftpbP50405 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.71□□□□□ -0.53
SftpbP50405 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SftpbP50405 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.71□□□□□ -0.53
SftpbP50405 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SftpbP50405 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
SftpbP50405 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SftpbP50405 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SftpbP50405 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
SftpbP50405 Gm14071-201ENSMUST00000117817 509 ntBASIC11.71□□□□□ -0.53
SftpbP50405 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SftpbP50405 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 136.8 ms