Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-6P43688 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-6P43688 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.9□□□□□ -0.66
Nkx2-6P43688 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.9□□□□□ -0.66
Nkx2-6P43688 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Nkx2-6P43688 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.9□□□□□ -0.66
Nkx2-6P43688 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-6P43688 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.9□□□□□ -0.66
Nkx2-6P43688 Rn7s6-201ENSMUST00000175005 291 ntBASIC10.9□□□□□ -0.66
Nkx2-6P43688 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Gm7741-201ENSMUST00000181445 989 ntBASIC10.9□□□□□ -0.66
Nkx2-6P43688 Gm37028-201ENSMUST00000194276 107 ntBASIC10.9□□□□□ -0.66
Nkx2-6P43688 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Gm5298-201ENSMUST00000201122 892 ntBASIC10.9□□□□□ -0.66
Nkx2-6P43688 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-6P43688 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Gm4900-201ENSMUST00000222046 1628 ntBASIC10.9□□□□□ -0.66
Nkx2-6P43688 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-6P43688 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Nkx2-6P43688 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nkx2-6P43688 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Nkx2-6P43688 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nkx2-6P43688 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Nkx2-6P43688 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nkx2-6P43688 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-6P43688 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-6P43688 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Gm14395-201ENSMUST00000120494 563 ntBASIC10.89□□□□□ -0.67
Nkx2-6P43688 Gm13937-201ENSMUST00000121000 988 ntBASIC10.89□□□□□ -0.67
Nkx2-6P43688 Gm11675-201ENSMUST00000121873 832 ntBASIC10.89□□□□□ -0.67
Nkx2-6P43688 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.89□□□□□ -0.67
Nkx2-6P43688 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC10.89□□□□□ -0.67
Nkx2-6P43688 AC122346.3-201ENSMUST00000223983 306 ntBASIC10.89□□□□□ -0.67
Nkx2-6P43688 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms