Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Vps45-201ENSMUST00000015891 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd1P40201 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Chd1P40201 Deup1-203ENSMUST00000115593 3019 ntTSL 5 BASIC16.85■□□□□ 0.29
Chd1P40201 Rdh7-201ENSMUST00000047199 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd1P40201 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd1P40201 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chd1P40201 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Chd1P40201 Rab38-201ENSMUST00000107256 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd1P40201 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Chd1P40201 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd1P40201 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd1P40201 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd1P40201 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chd1P40201 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd1P40201 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd1P40201 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Chd1P40201 1700112J05Rik-201ENSMUST00000129353 793 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chd1P40201 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Chd1P40201 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Chd1P40201 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chd1P40201 Rwdd2a-203ENSMUST00000185566 1054 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Chd1P40201 AC132881.1-201ENSMUST00000223780 1062 ntBASIC16.84■□□□□ 0.29
Chd1P40201 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd1P40201 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chd1P40201 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd1P40201 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chd1P40201 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chd1P40201 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd1P40201 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd1P40201 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd1P40201 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chd1P40201 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chd1P40201 Gm14370-201ENSMUST00000122460 868 ntBASIC16.84■□□□□ 0.29
Chd1P40201 Gm25804-201ENSMUST00000122785 188 ntBASIC16.84■□□□□ 0.29
Chd1P40201 Gm15273-201ENSMUST00000142302 868 ntBASIC16.84■□□□□ 0.29
Chd1P40201 Gm7023-201ENSMUST00000147295 868 ntBASIC16.84■□□□□ 0.29
Chd1P40201 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC16.84■□□□□ 0.29
Chd1P40201 Gm9117-201ENSMUST00000177735 1098 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Chd1P40201 Gm14357-201ENSMUST00000178352 868 ntBASIC16.84■□□□□ 0.29
Chd1P40201 Gm14361-201ENSMUST00000178547 868 ntBASIC16.84■□□□□ 0.29
Chd1P40201 Gm14348-201ENSMUST00000179183 868 ntBASIC16.84■□□□□ 0.29
Chd1P40201 Gm18299-201ENSMUST00000192026 636 ntBASIC16.84■□□□□ 0.29
Chd1P40201 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC16.84■□□□□ 0.29
Chd1P40201 Gimd1-205ENSMUST00000212852 1234 ntTSL 5 BASIC16.84■□□□□ 0.29
Chd1P40201 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd1P40201 CT025642.1-201ENSMUST00000224734 1219 ntBASIC16.84■□□□□ 0.29
Chd1P40201 AC129017.2-201ENSMUST00000226118 1284 ntBASIC16.84■□□□□ 0.29
Chd1P40201 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd1P40201 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd1P40201 Gm9947-201ENSMUST00000067599 2920 ntBASIC16.83■□□□□ 0.29
Chd1P40201 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chd1P40201 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC16.83■□□□□ 0.29
Chd1P40201 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chd1P40201 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Chd1P40201 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
Chd1P40201 Gm37861-201ENSMUST00000193534 2869 ntBASIC16.83■□□□□ 0.29
Chd1P40201 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Chd1P40201 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chd1P40201 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Chd1P40201 Gm45110-201ENSMUST00000205704 1402 ntBASIC16.83■□□□□ 0.28
Chd1P40201 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chd1P40201 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chd1P40201 Snora68-201ENSMUST00000104375 131 ntBASIC16.83■□□□□ 0.28
Chd1P40201 Actg2-202ENSMUST00000121731 1273 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Chd1P40201 Gm6881-201ENSMUST00000121811 833 ntBASIC16.83■□□□□ 0.28
Chd1P40201 Gm16013-201ENSMUST00000152249 353 ntTSL 3 BASIC16.83■□□□□ 0.28
Chd1P40201 Gm23555-201ENSMUST00000157815 135 ntBASIC16.83■□□□□ 0.28
Chd1P40201 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chd1P40201 Gm44460-201ENSMUST00000196179 129 ntBASIC16.83■□□□□ 0.28
Chd1P40201 AC166061.1-201ENSMUST00000225163 1138 ntBASIC16.83■□□□□ 0.28
Chd1P40201 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chd1P40201 Krtap21-1-201ENSMUST00000078422 748 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Chd1P40201 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chd1P40201 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chd1P40201 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chd1P40201 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chd1P40201 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Chd1P40201 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chd1P40201 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chd1P40201 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chd1P40201 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd1P40201 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd1P40201 A1cf-204ENSMUST00000224564 1432 ntBASIC16.82■□□□□ 0.28
Chd1P40201 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chd1P40201 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chd1P40201 Gm12136-201ENSMUST00000120460 1209 ntBASIC16.82■□□□□ 0.28
Chd1P40201 n-R5s154-201ENSMUST00000122513 108 ntBASIC16.82■□□□□ 0.28
Chd1P40201 Gm15221-201ENSMUST00000144439 414 ntTSL 3 BASIC16.82■□□□□ 0.28
Chd1P40201 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC16.82■□□□□ 0.28
Chd1P40201 Trav9n-1-201ENSMUST00000185224 339 ntBASIC16.82■□□□□ 0.28
Chd1P40201 Gm38301-201ENSMUST00000195573 543 ntBASIC16.82■□□□□ 0.28
Chd1P40201 Gm45225-201ENSMUST00000206852 1139 ntBASIC16.82■□□□□ 0.28
Chd1P40201 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC16.82■□□□□ 0.28
Chd1P40201 AC164883.7-201ENSMUST00000228534 851 ntBASIC16.82■□□□□ 0.28
Chd1P40201 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd1P40201 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd1P40201 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC16.82■□□□□ 0.28
Chd1P40201 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd1P40201 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd1P40201 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms