Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Hmgn1P18608 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hmgn1P18608 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Hmgn1P18608 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hmgn1P18608 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Hmgn1P18608 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Hmgn1P18608 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Hmgn1P18608 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hmgn1P18608 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Hmgn1P18608 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Hmgn1P18608 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Hmgn1P18608 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Hmgn1P18608 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hmgn1P18608 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hmgn1P18608 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hmgn1P18608 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hmgn1P18608 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Hmgn1P18608 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hmgn1P18608 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hmgn1P18608 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Hmgn1P18608 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.5□□□□□ -0.73
Hmgn1P18608 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Hmgn1P18608 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hmgn1P18608 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.49□□□□□ -0.73
Hmgn1P18608 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Hmgn1P18608 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.49□□□□□ -0.73
Hmgn1P18608 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Hmgn1P18608 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.49□□□□□ -0.73
Hmgn1P18608 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hmgn1P18608 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hmgn1P18608 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Hmgn1P18608 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.49□□□□□ -0.73
Hmgn1P18608 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hmgn1P18608 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hmgn1P18608 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hmgn1P18608 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hmgn1P18608 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Hmgn1P18608 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.49□□□□□ -0.73
Hmgn1P18608 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Hmgn1P18608 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hmgn1P18608 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hmgn1P18608 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.49□□□□□ -0.73
Hmgn1P18608 Gm29396-201ENSMUST00000185659 716 ntBASIC10.49□□□□□ -0.73
Hmgn1P18608 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.49□□□□□ -0.73
Hmgn1P18608 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.49□□□□□ -0.73
Hmgn1P18608 Gm7940-201ENSMUST00000218195 769 ntBASIC10.49□□□□□ -0.73
Hmgn1P18608 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hmgn1P18608 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hmgn1P18608 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.49□□□□□ -0.73
Hmgn1P18608 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hmgn1P18608 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Hmgn1P18608 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hmgn1P18608 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hmgn1P18608 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.49□□□□□ -0.73
Hmgn1P18608 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.49□□□□□ -0.73
Hmgn1P18608 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hmgn1P18608 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hmgn1P18608 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hmgn1P18608 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hmgn1P18608 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hmgn1P18608 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hmgn1P18608 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hmgn1P18608 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hmgn1P18608 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hmgn1P18608 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.49□□□□□ -0.73
Hmgn1P18608 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hmgn1P18608 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hmgn1P18608 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hmgn1P18608 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hmgn1P18608 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Hmgn1P18608 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Hmgn1P18608 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Hmgn1P18608 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Hmgn1P18608 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hmgn1P18608 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hmgn1P18608 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.48□□□□□ -0.73
Hmgn1P18608 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hmgn1P18608 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hmgn1P18608 Gm5187-201ENSMUST00000117317 991 ntBASIC10.48□□□□□ -0.73
Hmgn1P18608 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.48□□□□□ -0.73
Hmgn1P18608 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Hmgn1P18608 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.48□□□□□ -0.73
Hmgn1P18608 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.48□□□□□ -0.73
Hmgn1P18608 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.48□□□□□ -0.73
Hmgn1P18608 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hmgn1P18608 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
Hmgn1P18608 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Hmgn1P18608 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hmgn1P18608 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hmgn1P18608 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.48□□□□□ -0.73
Hmgn1P18608 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.48□□□□□ -0.73
Hmgn1P18608 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hmgn1P18608 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hmgn1P18608 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Hmgn1P18608 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hmgn1P18608 Gm33366-201ENSMUST00000195583 3827 ntBASIC10.48□□□□□ -0.73
Hmgn1P18608 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hmgn1P18608 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hmgn1P18608 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hmgn1P18608 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms