Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Gm23771-201ENSMUST00000178702 110 ntBASIC11.34□□□□□ -0.59
Hoxa4P06798 Gm5523-201ENSMUST00000180415 997 ntBASIC11.34□□□□□ -0.59
Hoxa4P06798 Gm17826-201ENSMUST00000189720 798 ntBASIC11.34□□□□□ -0.59
Hoxa4P06798 Gm29067-201ENSMUST00000190821 470 ntBASIC11.34□□□□□ -0.59
Hoxa4P06798 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.34□□□□□ -0.59
Hoxa4P06798 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.34□□□□□ -0.59
Hoxa4P06798 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Hoxa4P06798 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Hoxa4P06798 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Hoxa4P06798 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Hoxa4P06798 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa4P06798 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa4P06798 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Hoxa4P06798 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Hoxa4P06798 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa4P06798 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa4P06798 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Hoxa4P06798 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.33□□□□□ -0.6
Hoxa4P06798 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa4P06798 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Hoxa4P06798 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Hoxa4P06798 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Hoxa4P06798 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa4P06798 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Hoxa4P06798 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa4P06798 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Hoxa4P06798 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa4P06798 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.33□□□□□ -0.6
Hoxa4P06798 Gm15131-201ENSMUST00000119124 595 ntBASIC11.33□□□□□ -0.6
Hoxa4P06798 Gm11246-201ENSMUST00000120880 345 ntBASIC11.33□□□□□ -0.6
Hoxa4P06798 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa4P06798 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa4P06798 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.33□□□□□ -0.6
Hoxa4P06798 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa4P06798 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa4P06798 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa4P06798 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Hoxa4P06798 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa4P06798 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Hoxa4P06798 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.33□□□□□ -0.6
Hoxa4P06798 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.33□□□□□ -0.6
Hoxa4P06798 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa4P06798 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.33□□□□□ -0.6
Hoxa4P06798 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa4P06798 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Hoxa4P06798 Snora73b-201ENSMUST00000083419 205 ntBASIC11.33□□□□□ -0.6
Hoxa4P06798 Gm23105-201ENSMUST00000083719 134 ntBASIC11.33□□□□□ -0.6
Hoxa4P06798 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa4P06798 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa4P06798 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa4P06798 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa4P06798 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa4P06798 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.33□□□□□ -0.6
Hoxa4P06798 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa4P06798 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.33□□□□□ -0.6
Hoxa4P06798 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa4P06798 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.33□□□□□ -0.6
Hoxa4P06798 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa4P06798 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.33□□□□□ -0.6
Hoxa4P06798 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa4P06798 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa4P06798 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa4P06798 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Hoxa4P06798 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa4P06798 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa4P06798 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa4P06798 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa4P06798 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa4P06798 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Hoxa4P06798 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa4P06798 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa4P06798 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa4P06798 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa4P06798 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa4P06798 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa4P06798 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Hoxa4P06798 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.32□□□□□ -0.6
Hoxa4P06798 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa4P06798 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa4P06798 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.32□□□□□ -0.6
Hoxa4P06798 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa4P06798 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.32□□□□□ -0.6
Hoxa4P06798 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.32□□□□□ -0.6
Hoxa4P06798 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa4P06798 Gm25076-201ENSMUST00000104098 132 ntBASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms