Protein–RNA interactions for Protein: P01575

Ifnb1, Interferon beta, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifnb1P01575 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.11□□□□□ -0.47
Ifnb1P01575 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ifnb1P01575 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ifnb1P01575 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ifnb1P01575 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ifnb1P01575 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ifnb1P01575 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ifnb1P01575 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ifnb1P01575 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ifnb1P01575 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ifnb1P01575 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ifnb1P01575 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ifnb1P01575 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ifnb1P01575 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ifnb1P01575 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ifnb1P01575 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ifnb1P01575 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ifnb1P01575 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ifnb1P01575 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ifnb1P01575 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ifnb1P01575 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifnb1P01575 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifnb1P01575 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifnb1P01575 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ifnb1P01575 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifnb1P01575 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.1□□□□□ -0.47
Ifnb1P01575 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifnb1P01575 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.1□□□□□ -0.47
Ifnb1P01575 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifnb1P01575 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Ifnb1P01575 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifnb1P01575 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ifnb1P01575 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifnb1P01575 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.1□□□□□ -0.47
Ifnb1P01575 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifnb1P01575 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifnb1P01575 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ifnb1P01575 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifnb1P01575 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ifnb1P01575 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.1□□□□□ -0.47
Ifnb1P01575 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ifnb1P01575 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.1□□□□□ -0.47
Ifnb1P01575 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.1□□□□□ -0.47
Ifnb1P01575 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ifnb1P01575 Gm17040-202ENSMUST00000170597 889 ntBASIC12.1□□□□□ -0.47
Ifnb1P01575 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ifnb1P01575 Gm2383-201ENSMUST00000181461 807 ntBASIC12.1□□□□□ -0.47
Ifnb1P01575 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.1□□□□□ -0.47
Ifnb1P01575 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ifnb1P01575 Gm4857-201ENSMUST00000192718 785 ntBASIC12.1□□□□□ -0.47
Ifnb1P01575 Gm4482-201ENSMUST00000200876 742 ntBASIC12.1□□□□□ -0.47
Ifnb1P01575 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.1□□□□□ -0.47
Ifnb1P01575 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifnb1P01575 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.1□□□□□ -0.47
Ifnb1P01575 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifnb1P01575 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ifnb1P01575 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifnb1P01575 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifnb1P01575 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ifnb1P01575 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifnb1P01575 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifnb1P01575 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifnb1P01575 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifnb1P01575 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifnb1P01575 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ifnb1P01575 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.1□□□□□ -0.47
Ifnb1P01575 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.1□□□□□ -0.47
Ifnb1P01575 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifnb1P01575 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifnb1P01575 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ifnb1P01575 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ifnb1P01575 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ifnb1P01575 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12.09□□□□□ -0.47
Ifnb1P01575 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ifnb1P01575 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ifnb1P01575 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ifnb1P01575 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ifnb1P01575 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ifnb1P01575 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ifnb1P01575 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ifnb1P01575 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ifnb1P01575 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ifnb1P01575 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.09□□□□□ -0.47
Ifnb1P01575 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ifnb1P01575 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.09□□□□□ -0.47
Ifnb1P01575 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ifnb1P01575 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ifnb1P01575 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ifnb1P01575 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ifnb1P01575 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ifnb1P01575 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Ifnb1P01575 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.09□□□□□ -0.47
Ifnb1P01575 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.09□□□□□ -0.47
Ifnb1P01575 Gm12266-201ENSMUST00000120311 962 ntBASIC12.09□□□□□ -0.47
Ifnb1P01575 Gm14277-201ENSMUST00000121195 360 ntBASIC12.09□□□□□ -0.47
Ifnb1P01575 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ifnb1P01575 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ifnb1P01575 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.09□□□□□ -0.47
Ifnb1P01575 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.09□□□□□ -0.47
Ifnb1P01575 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms