Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.83□□□□□ -0.52
CopeO89079 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
CopeO89079 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
CopeO89079 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
CopeO89079 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CopeO89079 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CopeO89079 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CopeO89079 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CopeO89079 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CopeO89079 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CopeO89079 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.82□□□□□ -0.52
CopeO89079 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CopeO89079 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.82□□□□□ -0.52
CopeO89079 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CopeO89079 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CopeO89079 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CopeO89079 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.82□□□□□ -0.52
CopeO89079 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
CopeO89079 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
CopeO89079 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CopeO89079 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CopeO89079 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.82□□□□□ -0.52
CopeO89079 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CopeO89079 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CopeO89079 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CopeO89079 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
CopeO89079 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CopeO89079 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CopeO89079 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CopeO89079 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CopeO89079 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
CopeO89079 Gm26047-201ENSMUST00000157308 113 ntBASIC11.82□□□□□ -0.52
CopeO89079 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CopeO89079 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.82□□□□□ -0.52
CopeO89079 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.82□□□□□ -0.52
CopeO89079 Gm26047-202ENSMUST00000198840 115 ntBASIC11.82□□□□□ -0.52
CopeO89079 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
CopeO89079 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.82□□□□□ -0.52
CopeO89079 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.82□□□□□ -0.52
CopeO89079 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CopeO89079 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CopeO89079 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CopeO89079 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CopeO89079 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
CopeO89079 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CopeO89079 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
CopeO89079 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CopeO89079 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CopeO89079 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.82□□□□□ -0.52
CopeO89079 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CopeO89079 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CopeO89079 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CopeO89079 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CopeO89079 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CopeO89079 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CopeO89079 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.82□□□□□ -0.52
CopeO89079 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.81□□□□□ -0.52
CopeO89079 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.81□□□□□ -0.52
CopeO89079 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopeO89079 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CopeO89079 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopeO89079 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopeO89079 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopeO89079 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopeO89079 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CopeO89079 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CopeO89079 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CopeO89079 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopeO89079 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopeO89079 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopeO89079 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopeO89079 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopeO89079 Gm12241-201ENSMUST00000118330 726 ntBASIC11.81□□□□□ -0.52
CopeO89079 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.81□□□□□ -0.52
CopeO89079 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.81□□□□□ -0.52
CopeO89079 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CopeO89079 Gm27572-201ENSMUST00000183702 255 ntBASIC11.81□□□□□ -0.52
CopeO89079 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.81□□□□□ -0.52
CopeO89079 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.81□□□□□ -0.52
CopeO89079 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.81□□□□□ -0.52
CopeO89079 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopeO89079 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopeO89079 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
CopeO89079 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms