Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Hcn1O88704 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.04□□□□□ -0.64
Hcn1O88704 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.04□□□□□ -0.64
Hcn1O88704 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.04□□□□□ -0.64
Hcn1O88704 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.04□□□□□ -0.64
Hcn1O88704 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.04□□□□□ -0.64
Hcn1O88704 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.04□□□□□ -0.64
Hcn1O88704 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.04□□□□□ -0.64
Hcn1O88704 AU022133-201ENSMUST00000200601 873 ntBASIC11.04□□□□□ -0.64
Hcn1O88704 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.04□□□□□ -0.64
Hcn1O88704 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.04□□□□□ -0.64
Hcn1O88704 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.04□□□□□ -0.64
Hcn1O88704 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 Gm8420-201ENSMUST00000097103 598 ntBASIC11.04□□□□□ -0.64
Hcn1O88704 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Hcn1O88704 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Hcn1O88704 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.04□□□□□ -0.64
Hcn1O88704 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.04□□□□□ -0.64
Hcn1O88704 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Hcn1O88704 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.04□□□□□ -0.64
Hcn1O88704 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hcn1O88704 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hcn1O88704 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hcn1O88704 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hcn1O88704 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Hcn1O88704 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Hcn1O88704 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.03□□□□□ -0.64
Hcn1O88704 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hcn1O88704 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hcn1O88704 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hcn1O88704 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hcn1O88704 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hcn1O88704 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hcn1O88704 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hcn1O88704 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.03□□□□□ -0.64
Hcn1O88704 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hcn1O88704 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Hcn1O88704 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.03□□□□□ -0.64
Hcn1O88704 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Hcn1O88704 Gm11509-201ENSMUST00000117358 325 ntBASIC11.03□□□□□ -0.64
Hcn1O88704 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.03□□□□□ -0.64
Hcn1O88704 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hcn1O88704 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hcn1O88704 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.03□□□□□ -0.64
Hcn1O88704 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hcn1O88704 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hcn1O88704 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Hcn1O88704 Gm5705-201ENSMUST00000066241 711 ntBASIC11.03□□□□□ -0.64
Hcn1O88704 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hcn1O88704 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hcn1O88704 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.03□□□□□ -0.64
Hcn1O88704 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hcn1O88704 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hcn1O88704 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hcn1O88704 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hcn1O88704 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Hcn1O88704 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hcn1O88704 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Hcn1O88704 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.03□□□□□ -0.64
Hcn1O88704 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.03□□□□□ -0.64
Hcn1O88704 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hcn1O88704 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hcn1O88704 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hcn1O88704 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Hcn1O88704 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hcn1O88704 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Hcn1O88704 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.03□□□□□ -0.64
Hcn1O88704 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hcn1O88704 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hcn1O88704 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Hcn1O88704 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Hcn1O88704 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hcn1O88704 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Hcn1O88704 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hcn1O88704 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Hcn1O88704 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.02□□□□□ -0.64
Hcn1O88704 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms