Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.41□□□□□ -0.58
Pdlim1O70400 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.41□□□□□ -0.58
Pdlim1O70400 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Pdlim1O70400 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.41□□□□□ -0.58
Pdlim1O70400 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Gm20426-201ENSMUST00000173657 440 ntBASIC11.41□□□□□ -0.58
Pdlim1O70400 Gm7741-201ENSMUST00000181445 989 ntBASIC11.41□□□□□ -0.58
Pdlim1O70400 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.41□□□□□ -0.58
Pdlim1O70400 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.41□□□□□ -0.58
Pdlim1O70400 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pdlim1O70400 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pdlim1O70400 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pdlim1O70400 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.41□□□□□ -0.58
Pdlim1O70400 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Pdlim1O70400 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Pdlim1O70400 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.41□□□□□ -0.58
Pdlim1O70400 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.41□□□□□ -0.58
Pdlim1O70400 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.41□□□□□ -0.58
Pdlim1O70400 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pdlim1O70400 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim1O70400 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Pdlim1O70400 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim1O70400 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim1O70400 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim1O70400 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim1O70400 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim1O70400 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim1O70400 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim1O70400 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim1O70400 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Pdlim1O70400 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim1O70400 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Pdlim1O70400 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim1O70400 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim1O70400 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim1O70400 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim1O70400 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.4□□□□□ -0.58
Pdlim1O70400 Gm13611-201ENSMUST00000118269 318 ntBASIC11.4□□□□□ -0.58
Pdlim1O70400 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.4□□□□□ -0.58
Pdlim1O70400 Gm11956-201ENSMUST00000119525 512 ntBASIC11.4□□□□□ -0.58
Pdlim1O70400 Gm11244-201ENSMUST00000121243 237 ntBASIC11.4□□□□□ -0.58
Pdlim1O70400 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.4□□□□□ -0.58
Pdlim1O70400 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.4□□□□□ -0.58
Pdlim1O70400 Gm9089-201ENSMUST00000122027 526 ntBASIC11.4□□□□□ -0.58
Pdlim1O70400 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim1O70400 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.4□□□□□ -0.58
Pdlim1O70400 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.4□□□□□ -0.58
Pdlim1O70400 Gm10051-201ENSMUST00000145209 414 ntBASIC11.4□□□□□ -0.58
Pdlim1O70400 Gm21092-201ENSMUST00000178995 955 ntBASIC11.4□□□□□ -0.58
Pdlim1O70400 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.4□□□□□ -0.58
Pdlim1O70400 Gm18827-201ENSMUST00000188341 790 ntBASIC11.4□□□□□ -0.58
Pdlim1O70400 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.4□□□□□ -0.58
Pdlim1O70400 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.4□□□□□ -0.58
Pdlim1O70400 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim1O70400 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim1O70400 Olfr584-201ENSMUST00000098210 964 ntBASIC11.4□□□□□ -0.58
Pdlim1O70400 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Pdlim1O70400 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim1O70400 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim1O70400 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim1O70400 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim1O70400 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim1O70400 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Pdlim1O70400 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.4□□□□□ -0.59
Pdlim1O70400 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Pdlim1O70400 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pdlim1O70400 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.4□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms