Protein–RNA interactions for Protein: O35488

Slc27a2, Very long-chain acyl-CoA synthetase, mousemouse

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc27a2O35488 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc27a2O35488 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc27a2O35488 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc27a2O35488 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.6□□□□□ -0.55
Slc27a2O35488 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Slc27a2O35488 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc27a2O35488 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Slc27a2O35488 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc27a2O35488 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Slc27a2O35488 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Slc27a2O35488 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Slc27a2O35488 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Slc27a2O35488 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Slc27a2O35488 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Slc27a2O35488 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.59□□□□□ -0.55
Slc27a2O35488 Gm15547-201ENSMUST00000122152 333 ntBASIC11.59□□□□□ -0.55
Slc27a2O35488 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.59□□□□□ -0.55
Slc27a2O35488 Snora78-201ENSMUST00000158630 128 ntBASIC11.59□□□□□ -0.55
Slc27a2O35488 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.59□□□□□ -0.55
Slc27a2O35488 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.59□□□□□ -0.55
Slc27a2O35488 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.59□□□□□ -0.55
Slc27a2O35488 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Slc27a2O35488 Gm18065-201ENSMUST00000221395 526 ntBASIC11.59□□□□□ -0.55
Slc27a2O35488 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Slc27a2O35488 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Slc27a2O35488 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.59□□□□□ -0.55
Slc27a2O35488 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Slc27a2O35488 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc27a2O35488 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Slc27a2O35488 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Slc27a2O35488 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Slc27a2O35488 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.58□□□□□ -0.55
Slc27a2O35488 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.58□□□□□ -0.55
Slc27a2O35488 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc27a2O35488 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Slc27a2O35488 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc27a2O35488 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc27a2O35488 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Slc27a2O35488 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Slc27a2O35488 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Slc27a2O35488 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc27a2O35488 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.58□□□□□ -0.56
Slc27a2O35488 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.58□□□□□ -0.56
Slc27a2O35488 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc27a2O35488 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Slc27a2O35488 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.58□□□□□ -0.56
Slc27a2O35488 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.58□□□□□ -0.56
Slc27a2O35488 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.58□□□□□ -0.56
Slc27a2O35488 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.58□□□□□ -0.56
Slc27a2O35488 Gm28937-201ENSMUST00000185413 695 ntBASIC11.58□□□□□ -0.56
Slc27a2O35488 Gm29396-201ENSMUST00000185659 716 ntBASIC11.58□□□□□ -0.56
Slc27a2O35488 Gm29400-201ENSMUST00000187208 695 ntBASIC11.58□□□□□ -0.56
Slc27a2O35488 Gm28662-201ENSMUST00000188446 695 ntBASIC11.58□□□□□ -0.56
Slc27a2O35488 Gm28251-201ENSMUST00000188835 695 ntBASIC11.58□□□□□ -0.56
Slc27a2O35488 Gm37318-201ENSMUST00000194325 695 ntBASIC11.58□□□□□ -0.56
Slc27a2O35488 Gm38017-201ENSMUST00000194768 695 ntBASIC11.58□□□□□ -0.56
Slc27a2O35488 Gm37287-201ENSMUST00000195449 695 ntBASIC11.58□□□□□ -0.56
Slc27a2O35488 Gm37793-201ENSMUST00000195548 695 ntBASIC11.58□□□□□ -0.56
Slc27a2O35488 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Slc27a2O35488 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
Slc27a2O35488 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc27a2O35488 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc27a2O35488 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Slc27a2O35488 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.58□□□□□ -0.56
Slc27a2O35488 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Slc27a2O35488 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Slc27a2O35488 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.58□□□□□ -0.56
Slc27a2O35488 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Slc27a2O35488 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC11.58□□□□□ -0.56
Slc27a2O35488 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc27a2O35488 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms