Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Gm12196-201ENSMUST00000120954 262 ntBASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf11bO08712 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfrsf11bO08712 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfrsf11bO08712 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfrsf11bO08712 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfrsf11bO08712 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfrsf11bO08712 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfrsf11bO08712 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfrsf11bO08712 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.65□□□□□ -0.55
Tnfrsf11bO08712 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Tnfrsf11bO08712 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Tnfrsf11bO08712 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf11bO08712 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf11bO08712 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.64□□□□□ -0.55
Tnfrsf11bO08712 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf11bO08712 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf11bO08712 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf11bO08712 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf11bO08712 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf11bO08712 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf11bO08712 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf11bO08712 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.64□□□□□ -0.55
Tnfrsf11bO08712 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf11bO08712 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf11bO08712 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Tnfrsf11bO08712 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf11bO08712 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Tnfrsf11bO08712 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.64□□□□□ -0.55
Tnfrsf11bO08712 Gm25881-201ENSMUST00000157783 103 ntBASIC11.64□□□□□ -0.55
Tnfrsf11bO08712 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Tnfrsf11bO08712 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Tnfrsf11bO08712 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.64□□□□□ -0.55
Tnfrsf11bO08712 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.64□□□□□ -0.55
Tnfrsf11bO08712 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf11bO08712 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.64□□□□□ -0.55
Tnfrsf11bO08712 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms