Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Gm6189-201ENSMUST00000164487 2082 ntBASIC9.26□□□□□ -0.93
Chd6A3KFM7 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Ube2l3-203ENSMUST00000115700 571 ntTSL 5 BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Zfp740-205ENSMUST00000121206 795 ntTSL 3 BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Gm32856-202ENSMUST00000212180 1134 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Chd6A3KFM7 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Gm10689-201ENSMUST00000098864 432 ntBASIC9.26□□□□□ -0.93
Chd6A3KFM7 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Gm29101-201ENSMUST00000188329 1471 ntBASIC9.26□□□□□ -0.93
Chd6A3KFM7 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Gm15793-201ENSMUST00000121857 495 ntBASIC9.25□□□□□ -0.93
Chd6A3KFM7 n-R5s154-201ENSMUST00000122513 108 ntBASIC9.25□□□□□ -0.93
Chd6A3KFM7 Gm25319-201ENSMUST00000122552 325 ntBASIC9.25□□□□□ -0.93
Chd6A3KFM7 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Gm18733-202ENSMUST00000174447 401 ntBASIC9.25□□□□□ -0.93
Chd6A3KFM7 Fam240a-201ENSMUST00000177678 499 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Gm5982-201ENSMUST00000196234 512 ntBASIC9.25□□□□□ -0.93
Chd6A3KFM7 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 AC133517.1-201ENSMUST00000225825 594 ntBASIC9.25□□□□□ -0.93
Chd6A3KFM7 Gnpnat1-202ENSMUST00000226276 710 ntBASIC9.25□□□□□ -0.93
Chd6A3KFM7 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC9.25□□□□□ -0.93
Chd6A3KFM7 Gm42467-201ENSMUST00000202954 1447 ntBASIC9.25□□□□□ -0.93
Chd6A3KFM7 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Gm3880-201ENSMUST00000122154 337 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Gm12796-201ENSMUST00000131864 344 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Gm43868-201ENSMUST00000205187 2114 ntBASIC9.25□□□□□ -0.93
Chd6A3KFM7 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Chd6A3KFM7 3110009E18Rik-201ENSMUST00000027637 1007 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Cenph-201ENSMUST00000075550 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Sav1-201ENSMUST00000021467 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 AC093022.4-203ENSMUST00000228523 2657 ntBASIC9.25□□□□□ -0.93
Chd6A3KFM7 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC9.25□□□□□ -0.93
Chd6A3KFM7 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Gm6098-201ENSMUST00000180234 330 ntBASIC9.25□□□□□ -0.93
Chd6A3KFM7 Ighv1-33-201ENSMUST00000193220 350 ntBASIC9.25□□□□□ -0.93
Chd6A3KFM7 Gm4866-201ENSMUST00000197408 589 ntBASIC9.25□□□□□ -0.93
Chd6A3KFM7 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC9.25□□□□□ -0.93
Chd6A3KFM7 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Gm45893-201ENSMUST00000211899 247 ntBASIC9.25□□□□□ -0.93
Chd6A3KFM7 Gm46376-201ENSMUST00000222653 654 ntTSL 3 BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Gm10015-201ENSMUST00000072570 465 ntBASIC9.25□□□□□ -0.93
Chd6A3KFM7 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Chd6A3KFM7 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Rab3c-202ENSMUST00000223922 2398 ntBASIC9.24□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms