Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Gm11663-201ENSMUST00000117888 290 ntBASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Gm15207-201ENSMUST00000119259 442 ntBASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Gm17040-202ENSMUST00000170597 889 ntBASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Gm28937-201ENSMUST00000185413 695 ntBASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Gm29400-201ENSMUST00000187208 695 ntBASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Gm29199-201ENSMUST00000187766 775 ntBASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Gm28662-201ENSMUST00000188446 695 ntBASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Gm28251-201ENSMUST00000188835 695 ntBASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Gm37318-201ENSMUST00000194325 695 ntBASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Gm38017-201ENSMUST00000194768 695 ntBASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Gm37287-201ENSMUST00000195449 695 ntBASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Gm37793-201ENSMUST00000195548 695 ntBASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 CT025694.1-201ENSMUST00000226188 934 ntBASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
ClcnkaQ9WUB7 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
ClcnkaQ9WUB7 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
ClcnkaQ9WUB7 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
ClcnkaQ9WUB7 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.65□□□□□ -0.71
ClcnkaQ9WUB7 Rgr-203ENSMUST00000225070 4704 ntBASIC10.65□□□□□ -0.71
ClcnkaQ9WUB7 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms