Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Gm9353-201ENSMUST00000200472 604 ntBASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Gm5451-201ENSMUST00000080545 579 ntBASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Gm23272-201ENSMUST00000104053 129 ntBASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Gm15881-201ENSMUST00000148792 942 ntBASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Gm25492-201ENSMUST00000157383 129 ntBASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Gm21778-201ENSMUST00000178779 471 ntBASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Nsd1-205ENSMUST00000224693 852 ntBASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk3aQ9JKX8 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms