Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tubb3Q9ERD7 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.46□□□□□ -0.57
Tubb3Q9ERD7 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tubb3Q9ERD7 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Tubb3Q9ERD7 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Tubb3Q9ERD7 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Tubb3Q9ERD7 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tubb3Q9ERD7 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.46□□□□□ -0.57
Tubb3Q9ERD7 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.46□□□□□ -0.57
Tubb3Q9ERD7 Gm12196-201ENSMUST00000120954 262 ntBASIC11.46□□□□□ -0.57
Tubb3Q9ERD7 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tubb3Q9ERD7 Gm25881-201ENSMUST00000157783 103 ntBASIC11.46□□□□□ -0.57
Tubb3Q9ERD7 Gm23699-201ENSMUST00000158835 135 ntBASIC11.46□□□□□ -0.57
Tubb3Q9ERD7 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.46□□□□□ -0.57
Tubb3Q9ERD7 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tubb3Q9ERD7 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.46□□□□□ -0.57
Tubb3Q9ERD7 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.46□□□□□ -0.57
Tubb3Q9ERD7 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tubb3Q9ERD7 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tubb3Q9ERD7 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tubb3Q9ERD7 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tubb3Q9ERD7 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
Tubb3Q9ERD7 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Tubb3Q9ERD7 Erich3-203ENSMUST00000189969 3460 ntBASIC11.46□□□□□ -0.58
Tubb3Q9ERD7 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.46□□□□□ -0.58
Tubb3Q9ERD7 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.46□□□□□ -0.58
Tubb3Q9ERD7 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.46□□□□□ -0.58
Tubb3Q9ERD7 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.46□□□□□ -0.58
Tubb3Q9ERD7 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Tubb3Q9ERD7 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tubb3Q9ERD7 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tubb3Q9ERD7 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tubb3Q9ERD7 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Tubb3Q9ERD7 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tubb3Q9ERD7 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.46□□□□□ -0.58
Tubb3Q9ERD7 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tubb3Q9ERD7 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tubb3Q9ERD7 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.46□□□□□ -0.58
Tubb3Q9ERD7 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Gm12176-201ENSMUST00000121420 875 ntBASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Gm4607-201ENSMUST00000206649 577 ntBASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tubb3Q9ERD7 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms