Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Gm13171-201ENSMUST00000117233 391 ntBASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Gm29808-201ENSMUST00000194419 468 ntBASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-4Q9EQM3 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Gm15374-201ENSMUST00000119313 844 ntBASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Gm8019-201ENSMUST00000119317 587 ntBASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Gm13284-201ENSMUST00000121020 547 ntBASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Gm25343-201ENSMUST00000157460 107 ntBASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 AC169511.1-201ENSMUST00000227639 995 ntBASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Nkx2-4Q9EQM3 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms