Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Gm22133-201ENSMUST00000102082 109 ntBASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Mir1938-201ENSMUST00000158746 100 ntBASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Gm26361-201ENSMUST00000158868 186 ntBASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Olfr1347-205ENSMUST00000220413 964 ntBASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Gm5705-201ENSMUST00000066241 711 ntBASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Gm24749-201ENSMUST00000157838 343 ntBASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Gm4310-201ENSMUST00000177847 889 ntBASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4cQ9D7F7 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.74□□□□□ -0.21
Chmp4cQ9D7F7 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp4cQ9D7F7 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp4cQ9D7F7 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp4cQ9D7F7 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp4cQ9D7F7 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Chmp4cQ9D7F7 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp4cQ9D7F7 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp4cQ9D7F7 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp4cQ9D7F7 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp4cQ9D7F7 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp4cQ9D7F7 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp4cQ9D7F7 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Chmp4cQ9D7F7 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Chmp4cQ9D7F7 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp4cQ9D7F7 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp4cQ9D7F7 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp4cQ9D7F7 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp4cQ9D7F7 Gm15711-201ENSMUST00000118889 535 ntBASIC13.74□□□□□ -0.21
Chmp4cQ9D7F7 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp4cQ9D7F7 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp4cQ9D7F7 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13.74□□□□□ -0.21
Chmp4cQ9D7F7 Gm27627-201ENSMUST00000183644 150 ntBASIC13.74□□□□□ -0.21
Chmp4cQ9D7F7 Gm29615-201ENSMUST00000185371 697 ntBASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms