Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Stag1Q9D3E6 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Stag1Q9D3E6 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Gm8899-201ENSMUST00000214635 1332 ntBASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Gm3836-201ENSMUST00000211377 1613 ntBASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Gm11422-201ENSMUST00000118925 1103 ntBASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Gm6407-201ENSMUST00000176468 549 ntBASIC13.73□□□□□ -0.21
Stag1Q9D3E6 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Gm7593-201ENSMUST00000187246 644 ntBASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Gm37284-201ENSMUST00000193607 539 ntBASIC13.73□□□□□ -0.21
Stag1Q9D3E6 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Gm43380-201ENSMUST00000200421 220 ntBASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Gm3726-201ENSMUST00000203110 785 ntBASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Ap3s1-202ENSMUST00000224622 978 ntBASIC13.73□□□□□ -0.21
Stag1Q9D3E6 AC129308.3-201ENSMUST00000225652 524 ntBASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Stag1Q9D3E6 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 AC158636.1-201ENSMUST00000220118 1393 ntBASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Gm9415-201ENSMUST00000200462 1321 ntBASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Gm12990-201ENSMUST00000120372 468 ntBASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 CT009527.1-201ENSMUST00000224205 339 ntBASIC13.72□□□□□ -0.21
Stag1Q9D3E6 CT030653.1-201ENSMUST00000224382 1279 ntBASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Gm5805-201ENSMUST00000072779 456 ntBASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 AC130823.1-201ENSMUST00000228929 1549 ntBASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Stag1Q9D3E6 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms