Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Gm1335-201ENSMUST00000121653 386 ntBASIC11.59□□□□□ -0.55
Trim42Q9D2H5 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Gm27682-201ENSMUST00000183930 110 ntBASIC11.59□□□□□ -0.55
Trim42Q9D2H5 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.59□□□□□ -0.55
Trim42Q9D2H5 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim42Q9D2H5 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.58□□□□□ -0.55
Trim42Q9D2H5 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trim42Q9D2H5 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Gm37954-201ENSMUST00000195400 2071 ntBASIC11.58□□□□□ -0.56
Trim42Q9D2H5 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Gm11591-201ENSMUST00000120063 702 ntBASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.58□□□□□ -0.56
Trim42Q9D2H5 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Gm9996-201ENSMUST00000070359 913 ntBASIC11.58□□□□□ -0.56
Trim42Q9D2H5 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms