Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Gm38158-201ENSMUST00000194617 339 ntBASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Gm19287-201ENSMUST00000203190 358 ntBASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chaf1bQ9D0N7 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Gm17150-201ENSMUST00000165577 381 ntBASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Mospd4-201ENSMUST00000180618 576 ntBASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chaf1bQ9D0N7 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chaf1bQ9D0N7 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
Chaf1bQ9D0N7 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Chaf1bQ9D0N7 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chaf1bQ9D0N7 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Chaf1bQ9D0N7 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chaf1bQ9D0N7 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chaf1bQ9D0N7 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Chaf1bQ9D0N7 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Chaf1bQ9D0N7 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chaf1bQ9D0N7 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chaf1bQ9D0N7 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Chaf1bQ9D0N7 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.77□□□□□ -0.69
Chaf1bQ9D0N7 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms