Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Gm8731-201ENSMUST00000118088 412 ntBASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Gm37466-201ENSMUST00000195692 652 ntBASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Rpa3Q9CQ71 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Gm16570-201ENSMUST00000161951 436 ntBASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Gm8459-201ENSMUST00000162504 760 ntBASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Gm3150-201ENSMUST00000166418 204 ntBASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Gm43966-201ENSMUST00000203301 612 ntBASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rpa3Q9CQ71 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms