Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim16Q99PP9 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Gm23949-201ENSMUST00000104027 127 ntBASIC11.29□□□□□ -0.6
Trim16Q99PP9 Gm15711-201ENSMUST00000118889 535 ntBASIC11.29□□□□□ -0.6
Trim16Q99PP9 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Gm24990-201ENSMUST00000157406 323 ntBASIC11.29□□□□□ -0.6
Trim16Q99PP9 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.29□□□□□ -0.6
Trim16Q99PP9 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.29□□□□□ -0.6
Trim16Q99PP9 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim16Q99PP9 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC11.28□□□□□ -0.6
Trim16Q99PP9 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.28□□□□□ -0.6
Trim16Q99PP9 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim16Q99PP9 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.28□□□□□ -0.6
Trim16Q99PP9 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim16Q99PP9 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Gm14028-201ENSMUST00000117434 479 ntBASIC11.28□□□□□ -0.6
Trim16Q99PP9 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Gm27341-201ENSMUST00000183570 106 ntBASIC11.28□□□□□ -0.6
Trim16Q99PP9 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Gm28071-201ENSMUST00000190355 478 ntBASIC11.28□□□□□ -0.6
Trim16Q99PP9 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.28□□□□□ -0.6
Trim16Q99PP9 Gm9136-201ENSMUST00000193368 454 ntBASIC11.28□□□□□ -0.6
Trim16Q99PP9 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.28□□□□□ -0.6
Trim16Q99PP9 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.28□□□□□ -0.6
Trim16Q99PP9 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.28□□□□□ -0.6
Trim16Q99PP9 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trim16Q99PP9 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.28□□□□□ -0.6
Trim16Q99PP9 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trim16Q99PP9 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim16Q99PP9 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim16Q99PP9 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim16Q99PP9 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim16Q99PP9 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trim16Q99PP9 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim16Q99PP9 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim16Q99PP9 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms