Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Gm12029-201ENSMUST00000120073 832 ntBASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Gm3329-201ENSMUST00000159873 556 ntBASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Gm8459-201ENSMUST00000162504 760 ntBASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Gm29499-201ENSMUST00000189151 486 ntBASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Gm28329-201ENSMUST00000191208 689 ntBASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Gm29171-201ENSMUST00000191397 486 ntBASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Gm6905-201ENSMUST00000205729 511 ntBASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.38□□□□□ -0.43
Tlr3Q99MB1 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Gm23251-201ENSMUST00000103773 110 ntBASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Gm11667-201ENSMUST00000119828 486 ntBASIC12.37□□□□□ -0.43
Tlr3Q99MB1 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Gm37246-201ENSMUST00000192665 835 ntBASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Gm44551-201ENSMUST00000208804 171 ntBASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.37□□□□□ -0.43
Tlr3Q99MB1 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tlr3Q99MB1 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms