Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Gm14127-201ENSMUST00000117906 678 ntBASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Gm14381-201ENSMUST00000122105 414 ntBASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Gm27627-201ENSMUST00000183644 150 ntBASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Gm38341-201ENSMUST00000195357 515 ntBASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Gm6439-201ENSMUST00000199849 862 ntBASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 AY036118-201ENSMUST00000200021 923 ntBASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Gm17812-201ENSMUST00000204935 318 ntBASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk5rap3Q99LM2 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Gm13665-201ENSMUST00000120830 528 ntBASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms