Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Gm13809-201ENSMUST00000117921 597 ntBASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Gm15566-201ENSMUST00000121130 590 ntBASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Gm6905-201ENSMUST00000205729 511 ntBASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb1Q91Y08 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb1Q91Y08 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.96□□□□□ -0.5
Pcdhb1Q91Y08 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb1Q91Y08 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb1Q91Y08 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Pcdhb1Q91Y08 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb1Q91Y08 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Pcdhb1Q91Y08 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb1Q91Y08 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb1Q91Y08 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb1Q91Y08 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb1Q91Y08 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Gm15595-201ENSMUST00000120840 961 ntBASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Gm12407-201ENSMUST00000180219 324 ntBASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Gm7848-201ENSMUST00000210739 718 ntBASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 114.4 ms