Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Gm14071-201ENSMUST00000117817 509 ntBASIC11.9□□□□□ -0.5
Trim60Q8VI40 Gm14381-201ENSMUST00000122105 414 ntBASIC11.9□□□□□ -0.5
Trim60Q8VI40 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.9□□□□□ -0.5
Trim60Q8VI40 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim60Q8VI40 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Gm5616-201ENSMUST00000165252 384 ntBASIC11.9□□□□□ -0.5
Trim60Q8VI40 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Gm8741-201ENSMUST00000174736 384 ntBASIC11.9□□□□□ -0.5
Trim60Q8VI40 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Gm27516-201ENSMUST00000184237 98 ntBASIC11.9□□□□□ -0.5
Trim60Q8VI40 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.9□□□□□ -0.5
Trim60Q8VI40 AA914427-201ENSMUST00000193194 1166 ntBASIC11.9□□□□□ -0.5
Trim60Q8VI40 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.9□□□□□ -0.5
Trim60Q8VI40 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.9□□□□□ -0.5
Trim60Q8VI40 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim60Q8VI40 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trim60Q8VI40 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trim60Q8VI40 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim60Q8VI40 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.89□□□□□ -0.51
Trim60Q8VI40 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim60Q8VI40 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim60Q8VI40 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim60Q8VI40 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.89□□□□□ -0.51
Trim60Q8VI40 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.89□□□□□ -0.51
Trim60Q8VI40 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.89□□□□□ -0.51
Trim60Q8VI40 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim60Q8VI40 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.89□□□□□ -0.51
Trim60Q8VI40 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim60Q8VI40 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim60Q8VI40 Mir7677-201ENSMUST00000184226 67 ntBASIC11.89□□□□□ -0.51
Trim60Q8VI40 Gm29615-201ENSMUST00000185371 697 ntBASIC11.89□□□□□ -0.51
Trim60Q8VI40 Gm28224-201ENSMUST00000186078 697 ntBASIC11.89□□□□□ -0.51
Trim60Q8VI40 Gm29001-201ENSMUST00000186177 697 ntBASIC11.89□□□□□ -0.51
Trim60Q8VI40 Gm28292-201ENSMUST00000186593 697 ntBASIC11.89□□□□□ -0.51
Trim60Q8VI40 Gm28101-201ENSMUST00000187608 697 ntBASIC11.89□□□□□ -0.51
Trim60Q8VI40 Gm29076-201ENSMUST00000187689 697 ntBASIC11.89□□□□□ -0.51
Trim60Q8VI40 Gm28302-201ENSMUST00000187931 697 ntBASIC11.89□□□□□ -0.51
Trim60Q8VI40 Gm28646-201ENSMUST00000188220 697 ntBASIC11.89□□□□□ -0.51
Trim60Q8VI40 Gm28205-201ENSMUST00000189177 697 ntBASIC11.89□□□□□ -0.51
Trim60Q8VI40 Gm29032-201ENSMUST00000189797 697 ntBASIC11.89□□□□□ -0.51
Trim60Q8VI40 Gm28695-201ENSMUST00000190300 697 ntBASIC11.89□□□□□ -0.51
Trim60Q8VI40 Gm37448-201ENSMUST00000192795 697 ntBASIC11.89□□□□□ -0.51
Trim60Q8VI40 Gm38317-201ENSMUST00000195564 343 ntBASIC11.89□□□□□ -0.51
Trim60Q8VI40 Gm44364-201ENSMUST00000198368 141 ntBASIC11.89□□□□□ -0.51
Trim60Q8VI40 Gm17812-201ENSMUST00000204935 318 ntBASIC11.89□□□□□ -0.51
Trim60Q8VI40 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim60Q8VI40 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.89□□□□□ -0.51
Trim60Q8VI40 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.89□□□□□ -0.51
Trim60Q8VI40 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim60Q8VI40 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim60Q8VI40 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim60Q8VI40 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim60Q8VI40 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim60Q8VI40 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim60Q8VI40 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trim60Q8VI40 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.89□□□□□ -0.51
Trim60Q8VI40 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trim60Q8VI40 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim60Q8VI40 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.89□□□□□ -0.51
Trim60Q8VI40 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim60Q8VI40 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim60Q8VI40 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Trim60Q8VI40 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim60Q8VI40 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim60Q8VI40 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim60Q8VI40 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.89□□□□□ -0.51
Trim60Q8VI40 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trim60Q8VI40 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim60Q8VI40 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim60Q8VI40 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim60Q8VI40 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms